RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 LRFN3Q9BTN0 628 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 PRDM16Q9HAZ2 1276 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 C11orf16Q9NQ32 467 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 ANKEF1Q9NU02 776 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 AGPAT5Q9NUQ2 364 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 CLDND1Q9NY35 253 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 DACT1Q9NYF0 836 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 MKL2Q9ULH7 1088 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 LZTS1Q9Y250 596 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 PCDHB12Q9Y5F1 795 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 PCDHGC5Q9Y5F6 944 aa7.4□□□□□ -1.22
TMEM116-208ENST00000549537 CACNA1AO00555 2505 aa7.4□□□□□ -1.23
TMEM116-208ENST00000549537 WDR87Q6ZQQ6 2873 aa7.4□□□□□ -1.23
TMEM116-208ENST00000549537 A0A087WWV3 80 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 PIK3R2O00459 728 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 ASAP2O43150 1006 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 B4GALT3O60512 393 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 MED24O75448 989 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 XRCC6P12956 609 aaKnown RBP eCLIP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 ATP2B1P20020 1258 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 PBX3P40426 434 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 TRAPPC10P48553 1259 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 RARRES1P49788 294 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 TOB1P50616 345 aaPredicted RBP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 PTENP60484 403 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 ERVFC1P60507 584 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 POU5F1BQ06416 359 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 CAPSQ13938 189 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 KCNC3Q14003 757 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 SAFBQ15424 915 aaKnown RBP eCLIP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 XKR9Q5GH70 373 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 UBXN11Q5T124 520 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 TWF2Q6IBS0 349 aaKnown RBP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 KCNT2Q6UVM3 1135 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 CATSPER4Q7RTX7 472 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 SRGAP1Q7Z6B7 1085 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 MRPL10Q7Z7H8 261 aaKnown RBP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 CATSPER3Q86XQ3 398 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 DEPDC4Q8N2C3 294 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 EFHBQ8N7U6 833 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 VN1R2Q8NFZ6 395 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 HELQQ8TDG4 1101 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 ASAP3Q8TDY4 903 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 TCP11Q8WWU5 503 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 LPPQ93052 612 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 C1QTNF1Q9BXJ1 281 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 INO80BQ9C086 356 aaPredicted RBP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 TLR9Q9NR96 1032 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 CLEC1BQ9P126 229 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 PIN4Q9Y237 131 aaKnown RBP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 RIF1Q5UIP0 2472 aaKnown RBP7.39□□□□□ -1.23
TMEM116-208ENST00000549537 DCHS1Q96JQ0 3298 aa7.39□□□□□ -1.23
TMEM116-208ENST00000549537 A0A1W2PRU2 124 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 TSPAN1O60635 241 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 OFD1O75665 1012 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 CSPG5O95196 566 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 EYA4O95677 639 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 OR52Z1P0C646 297 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 SRGAP2CP0DJJ0 459 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 GLRA2P23416 452 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 RPA1P27694 616 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 TECP42680 631 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 NRIP1P48552 1158 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 RAB27AP51159 221 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 AFF1P51825 1210 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 RBM10P98175 930 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 ZP2Q05996 745 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 MBTD1Q05BQ5 628 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 NCOA4Q13772 614 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 ELOAQ14241 798 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 MXD4Q14582 209 aaPredicted RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 ZNF174Q15697 407 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 SMAD2Q15796 467 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 DUSP6Q16828 381 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 EML3Q32P44 896 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 TTC38Q5R3I4 469 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 SPOUT1Q5T280 376 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 AGMOQ6ZNB7 445 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 TMEM173Q86WV6 379 aaPredicted RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 THNSL1Q8IYQ7 743 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 ABI1Q8IZP0 508 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 SLC39A11Q8N1S5 342 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 RNF149Q8NC42 400 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 RNF169Q8NCN4 708 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 SMG8Q8ND04 991 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 PIGOQ8TEQ8 1089 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 RSPH1Q8WYR4 309 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 MRPS27Q92552 414 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 TMX3Q96JJ7 454 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 ZNF558Q96NG5 402 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 TBC1D32Q96NH3 1257 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 POLR3CQ9BUI4 534 aaPredicted RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 OXCT2Q9BYC2 517 aaPredicted RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 MRPL9Q9BYD2 267 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 NFKBIZQ9BYH8 718 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 NUCKS1Q9H1E3 243 aaKnown RBP7.38□□□□□ -1.23
TMEM116-208ENST00000549537 EPHX3Q9H6B9 360 aa7.38□□□□□ -1.23
TMEM116-208ENST00000549537 TUFT1Q9NNX1 390 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms