RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 SLC6A14Q9UN76 642 aa11.91□□□□□ -0.5
TROAP-210ENST00000549534 NUP205Q92621 2012 aa11.91□□□□□ -0.5
TROAP-210ENST00000549534 DOCK6Q96HP0 2047 aa11.91□□□□□ -0.5
TROAP-210ENST00000549534 ZNF197O14709 1029 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 SH3BP5O60239 455 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 PPP1R11O60927 126 aaPredicted RBP11.9□□□□□ -0.5
TROAP-210ENST00000549534 TMOD1P28289 359 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 OR1G1P47890 313 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 SOX9P48436 509 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 GFPT1Q06210 699 aaPredicted RBP11.9□□□□□ -0.5
TROAP-210ENST00000549534 ATMQ13315 3056 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.5
TROAP-210ENST00000549534 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 SLCO6A1Q86UG4 719 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 YAF2Q8IY57 180 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 COLGALT2Q8IYK4 626 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 METTL13Q8N6R0 699 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 CEP76Q8TAP6 659 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 MED8Q96G25 268 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 COLEC11Q9BWP8 271 aa11.9□□□□□ -0.5
TROAP-210ENST00000549534 ZMYM6O95789 1325 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 MEIS3P2A8K0S8 358 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 MAGEB2O15479 319 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 HLA-EP13747 358 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 PTPN2P17706 415 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 ACTR2P61160 394 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 FCHO2Q0JRZ9 810 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 MTMR1Q13613 665 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 LONRF3Q496Y0 759 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 PRICKLE2Q7Z3G6 844 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 CHD1LQ86WJ1 897 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 PNMA1Q8ND90 353 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 CAMK1GQ96NX5 476 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 HHIPQ96QV1 700 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
TROAP-210ENST00000549534 RSAD1Q9HA92 442 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
TROAP-210ENST00000549534 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 IGKV6D-21A0A0A0MT36 114 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 WDR27A2RRH5 827 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 DKK1O94907 266 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 ATG7O95352 703 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 PARP1P09874 1014 aaKnown RBP11.88□□□□□ -0.51
TROAP-210ENST00000549534 ITGB5P18084 799 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 CXADRP78310 365 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 NUCB1Q02818 461 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 PREPLQ4J6C6 727 aaPredicted RBP11.88□□□□□ -0.51
TROAP-210ENST00000549534 PRSS36Q5K4E3 855 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 SPDYCQ5MJ68 293 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 PEAR1Q5VY43 1037 aaPredicted RBP11.88□□□□□ -0.51
TROAP-210ENST00000549534 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 SYT13Q7L8C5 426 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 RABEPKQ7Z6M1 372 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 NAXDQ8IW45 347 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 MINDY1Q8N5J2 469 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 LIN37Q96GY3 246 aaPredicted RBP11.88□□□□□ -0.51
TROAP-210ENST00000549534 TMEM209Q96SK2 561 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 CEP131Q9UPN4 1083 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 EML5Q05BV3 1969 aa11.88□□□□□ -0.51
TROAP-210ENST00000549534 TERTO14746 1132 aaKnown RBP11.87□□□□□ -0.51
TROAP-210ENST00000549534 POMCP01189 267 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 IGHDP01880 384 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 PCP11498 1178 aaKnown RBP11.87□□□□□ -0.51
TROAP-210ENST00000549534 CR2P20023 1033 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 GPC3P51654 580 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 GRSF1Q12849 480 aaKnown RBP eCLIP11.87□□□□□ -0.51
TROAP-210ENST00000549534 LY6DQ14210 128 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 PTPAQ15257 358 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 DUOXA1Q1HG43 343 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 LPCAT2Q7L5N7 544 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 HAUS6Q7Z4H7 955 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 MRPL10Q7Z7H8 261 aaKnown RBP11.87□□□□□ -0.51
TROAP-210ENST00000549534 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
TROAP-210ENST00000549534 NXPE2Q96DL1 559 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 B3GALT6Q96L58 329 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 GAD1Q99259 594 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 CLSTN3Q9BQT9 956 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 GPR62Q9BZJ7 368 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 UBN1Q9NPG3 1134 aa11.87□□□□□ -0.51
TROAP-210ENST00000549534 HEMK1Q9Y5R4 338 aaPredicted RBP11.87□□□□□ -0.51
TROAP-210ENST00000549534 NFASCO94856 1347 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 NOTCH4Q99466 2003 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 HEPACAM2A8MVW5 462 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 CFIP05156 583 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 SYPP08247 313 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 SERPINF2P08697 491 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 FGFR4P22455 802 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
TROAP-210ENST00000549534 VIPR2P41587 438 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 NT5C2P49902 561 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 DGKEP52429 567 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 DSC1Q08554 894 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 SPIRE1Q08AE8 756 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 SCLT1Q96NL6 688 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms