RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 ANKRD36BP1Q96IX9 119 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 ZBTB45Q96K62 511 aaPredicted RBP10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 SNX27Q96L92 541 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 CNOT6LQ96LI5 555 aaKnown RBP10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 UROC1Q96N76 676 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 DUSP9Q99956 384 aaKnown RBP10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 EIF2AQ9BY44 585 aaKnown RBP10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 TMEM117Q9H0C3 514 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 CBX8Q9HC52 389 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 SNTG2Q9NY99 539 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 CNTN3Q9P232 1028 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 STK39Q9UEW8 545 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 PARP2Q9UGN5 583 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 SLC4A7Q9Y6M7 1214 aa10.6□□□□□ -0.71
SMARCD1-206ENST00000549274 ANK1P16157 1881 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 TRIP11Q15643 1979 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 TTC26A0AVF1 554 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 ARHGEF37A1IGU5 675 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 P4HA2O15460 535 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 FAM189A1O60320 539 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 TNNC2P02585 160 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 THP07101 528 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 TMEM191BP0C7N4 346 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 KCNE1P15382 129 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 CYP3A5P20815 502 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 BMP8BP34820 402 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 ACOT2P49753 483 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 PMS1P54277 932 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 WDR5P61964 334 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 GRIK3Q13003 919 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 IQCB1Q15051 598 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 ENOX2Q16206 610 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 MAN2A1Q16706 1144 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 DUOXA2Q1HG44 320 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 UVSSAQ2YD98 709 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 XKR4Q5GH76 650 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 SMYD5Q6GMV2 418 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 ZNF365Q70YC5 407 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 ZNF598Q86UK7 904 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 CCDC150Q8NCX0 1101 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 SMG8Q8ND04 991 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 TOP1MTQ969P6 601 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 SAAL1Q96ER3 474 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 FAM193BQ96PV7 902 aaPredicted RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 CGRRF1Q99675 332 aa10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 NXF3Q9H4D5 531 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 UBQLN1Q9UMX0 589 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMARCD1-206ENST00000549274 COL4A6Q14031 1691 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 A0A1W2PPC1 479 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 KCNJ18B7U540 433 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 TISP43B9A030 160 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 PMM2O15305 246 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 AKAP3O75969 853 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 CXCL8P10145 99 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 TNNI1P19237 187 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 MAGEA10P43363 369 aaPredicted RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 MCCD1P59942 119 aaPredicted RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 RNASELQ05823 741 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 KCNJ12Q14500 433 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 TMEM132DQ14C87 1099 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 TCP11X2Q5H9J9 407 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 NOMO2Q5JPE7 1267 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 CDKAL1Q5VV42 579 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 TCERG1LQ5VWI1 586 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 CRELD2Q6UXH1 353 aaPredicted RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 OTOP2Q7RTS6 562 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 CDR2LQ86X02 465 aaPredicted RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 CBWD2Q8IUF1 395 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 TRIM59Q8IWR1 403 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 DHX40Q8IX18 779 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 CMTR2Q8IYT2 770 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 LRRC43Q8N309 656 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 RNF169Q8NCN4 708 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 PARD3BQ8TEW8 1205 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 FAM212AQ96EL1 285 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 FAM81BQ96LP2 452 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 RNPC3Q96LT9 517 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.58□□□□□ -0.721e-6■■■□□ 15
SMARCD1-206ENST00000549274 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 APOL6Q9BWW8 343 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 IMPG2Q9BZV3 1241 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 UBE2OQ9C0C9 1292 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 HAPLN2Q9GZV7 340 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 AAASQ9NRG9 546 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 ITGA11Q9UKX5 1188 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 RWDD3Q9Y3V2 267 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 DAAM1Q9Y4D1 1078 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 INSL6Q9Y581 213 aa10.58□□□□□ -0.72
SMARCD1-206ENST00000549274 FNDC1Q4ZHG4 1894 aaPredicted RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.57□□□□□ -0.72
SMARCD1-206ENST00000549274 GTPBP10A4D1E9 387 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms