RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SP9P0CG40 484 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 CREMQ03060 361 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 LIN9Q5TKA1 542 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 EEF1DP3Q658K8 133 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 NOSTRINQ8IVI9 506 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 C1orf210Q8IVY1 113 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 DIS3L2Q8IYB7 885 aaKnown RBP18.21■□□□□ 0.51
SSH1-208ENST00000548522 KIAA2013Q8IYS2 634 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 MAML2Q8IZL2 1156 aaPredicted RBP18.21■□□□□ 0.51
SSH1-208ENST00000548522 FGF13Q92913 245 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 FZD8Q9H461 694 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 HCFC1R1Q9NWW0 138 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 CDH7Q9ULB5 785 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 POLIQ9UNA4 740 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 DOCK6Q96HP0 2047 aa18.21■□□□□ 0.51
SSH1-208ENST00000548522 LIG1P18858 919 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 SNW1Q13573 536 aaKnown RBP18.2■□□□□ 0.5
SSH1-208ENST00000548522 ME3Q16798 604 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 PPM1LQ5SGD2 360 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 CATSPER3Q86XQ3 398 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 NSUN7Q8NE18 718 aaKnown RBP18.2■□□□□ 0.5
SSH1-208ENST00000548522 SLC7A14Q8TBB6 771 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 KXD1Q9BQD3 176 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 KIFC3Q9BVG8 833 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 BRMS1Q9HCU9 246 aa18.2■□□□□ 0.5
SSH1-208ENST00000548522 PRMT7Q9NVM4 692 aaPredicted RBP18.2■□□□□ 0.5
SSH1-208ENST00000548522 STARD6P59095 220 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 FAM187BQ17R55 369 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 GLRA4Q5JXX5 417 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 RSPO2Q6UXX9 243 aaPredicted RBP18.19■□□□□ 0.5
SSH1-208ENST00000548522 DCLK2Q8N568 766 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 WASF1Q92558 559 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 GTF3C6Q969F1 213 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 PRIMPOLQ96LW4 560 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 CCDC113Q9H0I3 377 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 POLD4Q9HCU8 107 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 GDAQ9Y2T3 454 aa18.19■□□□□ 0.5
SSH1-208ENST00000548522 MTF2Q9Y483 593 aaPredicted RBP18.19■□□□□ 0.5
SSH1-208ENST00000548522 MTCL1Q9Y4B5 1905 aaKnown RBP18.18■□□□□ 0.5
SSH1-208ENST00000548522 MED19A0JLT2 244 aaPredicted RBP18.18■□□□□ 0.5
SSH1-208ENST00000548522 PRKCBP05771 671 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 THP07101 528 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 HNRNPA1P09651 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
SSH1-208ENST00000548522 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 CD72P21854 359 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 ST3GAL1Q11201 340 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 PRPF4BQ13523 1007 aaKnown RBP18.18■□□□□ 0.5
SSH1-208ENST00000548522 TMEM132AQ24JP5 1023 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 POTEHQ6S545 545 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 ZBTB8OSQ8IWT0 167 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 NPAS3Q8IXF0 933 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 MCPH1Q8NEM0 835 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 ING5Q8WYH8 240 aa18.18■□□□□ 0.5
SSH1-208ENST00000548522 VWA8A3KMH1 1905 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 MYH15Q9Y2K3 1946 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 I3L4J1 428 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 N4BP3O15049 544 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 MCM7P33993 719 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 OR1D2P34982 312 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 ANP32AP39687 249 aaKnown RBP18.17■□□□□ 0.5
SSH1-208ENST00000548522 AXDND1Q5T1B0 1012 aaPredicted RBP18.17■□□□□ 0.5
SSH1-208ENST00000548522 HINFPQ9BQA5 517 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 DDX23Q9BUQ8 820 aaKnown RBP18.17■□□□□ 0.5
SSH1-208ENST00000548522 SEMA4AQ9H3S1 761 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 GOLGA2P5Q9HBQ8 144 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 ZFP37Q9Y6Q3 630 aaPredicted RBP18.17■□□□□ 0.5
SSH1-208ENST00000548522 CACNA1IQ9P0X4 2223 aa18.17■□□□□ 0.5
SSH1-208ENST00000548522 KANSL1LA0AUZ9 987 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSH1-208ENST00000548522 HOXA9P31269 272 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 GUCY1B3Q02153 619 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 MLF2Q15773 248 aaPredicted RBP18.16■□□□□ 0.5
SSH1-208ENST00000548522 MAPK6Q16659 721 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 SLC5A9Q2M3M2 681 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 PADI6Q6TGC4 694 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 CD300LGQ6UXG3 332 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 C3orf58Q8NDZ4 430 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 TUFT1Q9NNX1 390 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 DNMT3BQ9UBC3 853 aaKnown RBP18.16■□□□□ 0.5
SSH1-208ENST00000548522 MTRRQ9UBK8 725 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 CDY1Q9Y6F8 540 aa18.16■□□□□ 0.5
SSH1-208ENST00000548522 ACKR2O00590 384 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 XYLBO75191 536 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 FGFR3P22607 806 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 TKTP29401 623 aaKnown RBP18.15■□□□□ 0.5
SSH1-208ENST00000548522 CLCNKBP51801 687 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 RAB33AQ14088 237 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 UBXN2BQ14CS0 331 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 PABPC1LQ4VXU2 614 aaKnown RBP18.15■□□□□ 0.5
SSH1-208ENST00000548522 SLC44A4Q53GD3 710 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 ZC3H14Q6PJT7 736 aaKnown RBP18.15■□□□□ 0.5
SSH1-208ENST00000548522 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.15■□□□□ 0.5
SSH1-208ENST00000548522 MTSS1LQ765P7 747 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 SUMF1Q8NBK3 374 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 PPP1R10Q96QC0 940 aaKnown RBP18.15■□□□□ 0.5
SSH1-208ENST00000548522 C2orf40Q9H1Z8 148 aa18.15■□□□□ 0.5
SSH1-208ENST00000548522 SPATA6Q9NWH7 488 aaPredicted RBP18.15■□□□□ 0.5
SSH1-208ENST00000548522 NRG2O14511 850 aaPredicted RBP18.14■□□□□ 0.49
SSH1-208ENST00000548522 B3GAT3O94766 335 aa18.14■□□□□ 0.49
SSH1-208ENST00000548522 CYP11B2P19099 503 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms