RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 SCNN1GP51170 649 aa18.79■□□□□ 0.6
LETMD1-216ENST00000548401 SMAD3P84022 425 aaKnown RBP18.79■□□□□ 0.6
LETMD1-216ENST00000548401 PAN2Q504Q3 1202 aaKnown RBP18.79■□□□□ 0.6
LETMD1-216ENST00000548401 ANKRD40Q6AI12 368 aa18.79■□□□□ 0.6
LETMD1-216ENST00000548401 ABI1Q8IZP0 508 aa18.79■□□□□ 0.6
LETMD1-216ENST00000548401 LRRC43Q8N309 656 aa18.79■□□□□ 0.6
LETMD1-216ENST00000548401 XXYLT1Q8NBI6 393 aa18.79■□□□□ 0.6
LETMD1-216ENST00000548401 DUSP9Q99956 384 aaKnown RBP18.79■□□□□ 0.6
LETMD1-216ENST00000548401 TOPORSQ9NS56 1045 aaPredicted RBP18.79■□□□□ 0.6
LETMD1-216ENST00000548401 TBC1D13Q9NVG8 400 aa18.79■□□□□ 0.6
LETMD1-216ENST00000548401 INPP5FQ9Y2H2 1132 aa18.79■□□□□ 0.6
LETMD1-216ENST00000548401 LAMA2P24043 3122 aaKnown RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 LDHAP00338 332 aaKnown RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 NR2F2P24468 414 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 YARSP54577 528 aaKnown RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 TYRO3Q06418 890 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 NAB2Q15742 525 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 SNRNP35Q16560 246 aaKnown RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 STX1AQ16623 288 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 C11orf57Q6ZUT1 292 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 ZMAT2Q96NC0 199 aaKnown RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 ZBED2Q9BTP6 218 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 MRPL9Q9BYD2 267 aaKnown RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 GZF1Q9H116 711 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 PLEKHA5Q9HAU0 1116 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 MIOSQ9NXC5 875 aa18.78■□□□□ 0.6
LETMD1-216ENST00000548401 MRPL42Q9Y6G3 142 aaKnown RBP18.78■□□□□ 0.6
LETMD1-216ENST00000548401 KCNE1P15382 129 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 CASP4P49662 377 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 GRIK3Q13003 919 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 BTG3Q14201 252 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-216ENST00000548401 RAB30Q15771 203 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 GLRA4Q5JXX5 417 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 SASS6Q6UVJ0 657 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 URGCPQ8TCY9 931 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 PPP1R10Q96QC0 940 aaKnown RBP18.77■□□□□ 0.6
LETMD1-216ENST00000548401 RPS6KC1Q96S38 1066 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 TSG101Q99816 390 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 RPF1Q9H9Y2 349 aaKnown RBP18.77■□□□□ 0.6
LETMD1-216ENST00000548401 KIAA1586Q9HCI6 787 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 RBAKQ9NYW8 714 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-216ENST00000548401 RWDD2AQ9UIY3 292 aa18.77■□□□□ 0.6
LETMD1-216ENST00000548401 COL4A4P53420 1690 aaPredicted RBP18.76■□□□□ 0.59
LETMD1-216ENST00000548401 BICDL2A1A5D9 508 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 SYCE3A1L190 88 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 LINC01553A4QN01 128 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 EXOC3O60645 756 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 AKAP3O75969 853 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 LETM1O95202 739 aaPredicted RBP18.76■□□□□ 0.59
LETMD1-216ENST00000548401 POMCP01189 267 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 CA3P07451 260 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 DNAJB2P25686 324 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 STX17P56962 302 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 PPP2R3AQ06190 1150 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 CYP24A1Q07973 514 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 DSC1Q08554 894 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 EFCAB13Q8IY85 973 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 CLP1Q92989 425 aaKnown RBP18.76■□□□□ 0.59
LETMD1-216ENST00000548401 CWH43Q9H720 699 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 ANO10Q9NW15 660 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 DACH1Q9UI36 760 aa18.76■□□□□ 0.59
LETMD1-216ENST00000548401 SMIM28A0A1B0GU29 152 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 ZNF233A6NK53 670 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 LACTBL1A8MY62 500 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 SOX1O00570 391 aaPredicted RBP18.75■□□□□ 0.59
LETMD1-216ENST00000548401 MAPK13O15264 365 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 NFICP08651 508 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 ERCC5P28715 1186 aaPredicted RBP18.75■□□□□ 0.59
LETMD1-216ENST00000548401 SPRED2Q7Z698 418 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 PLEKHO2Q8TD55 490 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 NOC3LQ8WTT2 800 aaKnown RBP18.75■□□□□ 0.59
LETMD1-216ENST00000548401 EEF2KMTQ96G04 330 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 MKNK1Q9BUB5 465 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 NKX2-4Q9H2Z4 354 aa18.75■□□□□ 0.59
LETMD1-216ENST00000548401 PTPRJQ12913 1337 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 DDHD2O94830 711 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 IL18RAPO95256 599 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 RPL13P26373 211 aaKnown RBP18.74■□□□□ 0.59
LETMD1-216ENST00000548401 FKBP3Q00688 224 aaKnown RBP18.74■□□□□ 0.59
LETMD1-216ENST00000548401 TAP1Q03518 808 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 SOX4Q06945 474 aaPredicted RBP18.74■□□□□ 0.59
LETMD1-216ENST00000548401 ADAM9Q13443 819 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 HSP90AA2PQ14568 343 aaPredicted RBP18.74■□□□□ 0.59
LETMD1-216ENST00000548401 PSMD6Q15008 389 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 ZBTB6Q15916 424 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 CT47A1Q5JQC4 288 aaPredicted RBP18.74■□□□□ 0.59
LETMD1-216ENST00000548401 CEP135Q66GS9 1140 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 ZNF280BQ86YH2 543 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 CD302Q8IX05 232 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 FIBCD1Q8N539 461 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 BORCS6Q96GS4 357 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 MFSD14AQ96MC6 490 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 ASB7Q9H672 318 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 NRDE2Q9H7Z3 1164 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 KANSL3Q9P2N6 904 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 DNAJB4Q9UDY4 337 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 TUBGCP4Q9UGJ1 667 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 C2CD2Q9Y426 696 aa18.74■□□□□ 0.59
LETMD1-216ENST00000548401 CHD9Q3L8U1 2897 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms