RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 CANXP27824 592 aaKnown RBP3.2□□□□□ -1.9
CEP290-204ENST00000547926 GPR3P46089 330 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 NPEPPSP55786 919 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 ERVK-21P61565 698 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 SPIDRQ14159 915 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 KLHL22Q53GT1 634 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 CCDC178Q5BJE1 867 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 TAS1R1Q7RTX1 841 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 ARHGEF19Q8IW93 802 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 ACAP3Q96P50 834 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 ORAI2Q96SN7 254 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 EIF2B4Q9UI10 523 aaKnown RBP3.2□□□□□ -1.9
CEP290-204ENST00000547926 ATP8A1Q9Y2Q0 1164 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 PRAMEF4O60810 478 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 CPEP16870 476 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 CTSSP25774 331 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 MPLP40238 635 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 ELLP55199 621 aaPredicted RBP3.2□□□□□ -1.9
CEP290-204ENST00000547926 NRG3P56975 720 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 PROK1P58294 105 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 SRSF2Q01130 221 aaKnown RBP3.2□□□□□ -1.9
CEP290-204ENST00000547926 AMPD3Q01432 767 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 TAP1Q03518 808 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 TP53BP2Q13625 1128 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 TOR2AQ5JU69 321 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 RNF219Q5W0B1 726 aaPredicted RBP3.2□□□□□ -1.9
CEP290-204ENST00000547926 CRELD2Q6UXH1 353 aaPredicted RBP3.2□□□□□ -1.9
CEP290-204ENST00000547926 KCNK18Q7Z418 384 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 SLC44A3Q8N4M1 653 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 OR5M3Q8NGP4 307 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 RSAD2Q8WXG1 361 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 ADAM2Q99965 735 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 ENKD1Q9H0I2 346 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 AKIP1Q9NQ31 210 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 TRPM5Q9NZQ8 1165 aa3.2□□□□□ -1.9
CEP290-204ENST00000547926 KCNAB3O43448 404 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 OSMP13725 252 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 CDKN1CP49918 316 aaPredicted RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 RNF187Q5TA31 235 aaPredicted RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 GLB1L3Q8NCI6 653 aaPredicted RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 DDB2Q92466 427 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 ARL8AQ96BM9 186 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 CCM2LQ9NUG4 571 aaPredicted RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 MCM8Q9UJA3 840 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 TRIM38O00635 465 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 ADCY6O43306 1168 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 HOXA3O43365 443 aaPredicted RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 LTA4HP09960 611 aaKnown RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 EVA1CP58658 441 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 DUSP2Q05923 314 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 SRSF4Q08170 494 aaKnown RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 MUM1Q2TAK8 710 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 BEAN1Q3B7T3 259 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 XYLT1Q86Y38 959 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 CNTD1Q8N815 330 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 SNX33Q8WV41 574 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 AUTS2Q8WXX7 1259 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 FAM193BQ96PV7 902 aaPredicted RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 SLC2A13Q96QE2 648 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 DMRT3Q9NQL9 472 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 SLC5A4Q9NY91 659 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 ZNF70Q9UC06 446 aaPredicted RBP3.19□□□□□ -1.9
CEP290-204ENST00000547926 TLK1Q9UKI8 766 aa3.19□□□□□ -1.9
CEP290-204ENST00000547926 ZMYM3Q14202 1370 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 WNT10BO00744 389 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 NRP1O14786 923 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 ITGA10O75578 1167 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 MRPS9P82933 396 aaKnown RBP3.18□□□□□ -1.9
CEP290-204ENST00000547926 NHLH1Q02575 133 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 ADRM1Q16186 407 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 Q6ZVL8 140 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 RAX2Q96IS3 184 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 LSM14BQ9BX40 385 aaKnown RBP3.18□□□□□ -1.9
CEP290-204ENST00000547926 EPC1Q9H2F5 836 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 IFT122Q9HBG6 1241 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 DNAJC28Q9NX36 388 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 MAP3K2Q9Y2U5 619 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 CHST2Q9Y4C5 530 aa3.18□□□□□ -1.9
CEP290-204ENST00000547926 K7ESF4 209 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 RECQL4O94761 1208 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 IPO13O94829 963 aaKnown RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 GNAT2P19087 354 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 CDK11BP21127 795 aaKnown RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 ADSLP30566 484 aaPredicted RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 IARSP41252 1262 aaKnown RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 WNT3AP56704 352 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 SIM1P81133 766 aaPredicted RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 MRPL49Q13405 166 aaKnown RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 FAM50AQ14320 339 aaKnown RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 ANKS6Q68DC2 871 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 SYT12Q8IV01 421 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 CBARPQ8N350 705 aaPredicted RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 REPS2Q8NFH8 660 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 FBXO18Q8NFZ0 1043 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 MDM1Q8TC05 714 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 RIN2Q8WYP3 895 aaPredicted RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 IL17RAQ96F46 866 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 SLC46A2Q9BY10 475 aa3.17□□□□□ -1.9
CEP290-204ENST00000547926 CCDC8Q9H0W5 538 aaPredicted RBP3.17□□□□□ -1.9
CEP290-204ENST00000547926 TMX1Q9H3N1 280 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms