RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CACTINQ8WUQ7 758 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 TRIM43Q96BQ3 446 aaPredicted RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 SCLYQ96I15 445 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 CGRRF1Q99675 332 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 OSBPL7Q9BZF2 842 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 TSPYL2Q9H2G4 693 aaPredicted RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 NXF3Q9H4D5 531 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 DERAQ9Y315 318 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 A0A1W2PQC6 194 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 TTC26A0AVF1 554 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 CCDC85CA6NKD9 419 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 TULP1O00294 542 aaPredicted RBP17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 EFCAB14O75071 495 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 EOMESO95936 686 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 CXCL8P10145 99 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 FMO5P49326 533 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 GPNMBQ14956 572 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 CNKSR3Q6P9H4 555 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 SMG8Q8ND04 991 aaKnown RBP17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 TMEM8AQ9HCN3 771 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 SNTG2Q9NY99 539 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 PARP2Q9UGN5 583 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 GIT1Q9Y2X7 761 aa17.16■□□□□ 0.34
TRAFD1-203ENST00000547063 LRRIQ3A6PVS8 624 aaPredicted RBP17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 C9IYK1 514 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 AP5Z1O43299 807 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 XPOTO43592 962 aaKnown RBP17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 EVI5O60447 810 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 MGEA5O60502 916 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 RECQL4O94761 1208 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 CDC25BP30305 580 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 IKBKEQ14164 716 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 DUOXA2Q1HG44 320 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 SLC10A6Q3KNW5 377 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 KRT39Q6A163 491 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 RSPH1Q8WYR4 309 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 IQCDQ96DY2 449 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 SNX27Q96L92 541 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 ERGIC2Q96RQ1 377 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 ELAC1Q9H777 363 aaKnown RBP17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 RALGAPA2Q2PPJ7 1873 aa17.15■□□□□ 0.34
TRAFD1-203ENST00000547063 LACTBL1A8MY62 500 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 TNNC2P02585 160 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 TMEM191BP0C7N4 346 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 ACTN1P12814 892 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 MXI1P50539 228 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 DLG4P78352 724 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 FAM189BP81408 668 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 MYL7Q01449 175 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 PPIGQ13427 754 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 GBP6Q6ZN66 633 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 DEFB128Q7Z7B8 93 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 ECHDC2Q86YB7 292 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 TMEM192Q8IY95 271 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 PLEKHO2Q8TD55 490 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 APOL6Q9BWW8 343 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 CNTN3Q9P232 1028 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 HES2Q9Y543 173 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 SCN5AQ14524 2016 aa17.14■□□□□ 0.33
TRAFD1-203ENST00000547063 ALPK3Q96L96 1907 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 GOLGA6L6A8MZA4 724 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 ENPP3O14638 875 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 KCNE1P15382 129 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 GCLMP48507 274 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 TMEM132DQ14C87 1099 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 EXOC3L4Q17RC7 722 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 C1orf220Q5T0J3 134 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 ALKAL1Q6UXT8 129 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 DRC7Q8IY82 874 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 C7orf61Q8IZ16 206 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 RPS6KC1Q96S38 1066 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 RSAD1Q9HA92 442 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 TMEM161AQ9NX61 479 aa17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRAFD1-203ENST00000547063 ANK1P16157 1881 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 TEX33O43247 280 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 HOXA2O43364 376 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 PHACTR2O75167 634 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 CSF2RAP15509 400 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 AKAP5P24588 427 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 TFAMQ00059 246 aaKnown RBP17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 BIRC3Q13489 604 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 TRIM14Q14142 442 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 ZACNQ401N2 412 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 SPECC1LQ69YQ0 1117 aa17.12■□□□□ 0.33
TRAFD1-203ENST00000547063 SV2AQ7L0J3 742 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms