RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 PIK3R5Q8WYR1 880 aa14.18□□□□□ -0.14
SCAF11-208ENST00000546534 NELL2Q99435 816 aa14.18□□□□□ -0.14
SCAF11-208ENST00000546534 TTPALQ9BTX7 342 aa14.18□□□□□ -0.14
SCAF11-208ENST00000546534 TRIM6Q9C030 488 aaPredicted RBP14.18□□□□□ -0.14
SCAF11-208ENST00000546534 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
SCAF11-208ENST00000546534 NCOA5Q9HCD5 579 aaKnown RBP14.18□□□□□ -0.14
SCAF11-208ENST00000546534 PRMT8Q9NR22 394 aaPredicted RBP14.18□□□□□ -0.14
SCAF11-208ENST00000546534 HCFC1R1Q9NWW0 138 aa14.18□□□□□ -0.14
SCAF11-208ENST00000546534 KLK14Q9P0G3 267 aa14.18□□□□□ -0.14
SCAF11-208ENST00000546534 GMEB2Q9UKD1 530 aa14.18□□□□□ -0.14
SCAF11-208ENST00000546534 DOCK6Q96HP0 2047 aa14.18□□□□□ -0.14
SCAF11-208ENST00000546534 SF3B1O75533 1304 aaKnown RBP eCLIP14.17□□□□□ -0.14
SCAF11-208ENST00000546534 M0R2N6 131 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 NCAM2O15394 837 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 ADAM12O43184 909 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 B4GALT5O43286 388 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 ARF4P18085 180 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-208ENST00000546534 HOXA9P31269 272 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 YWHABP31946 246 aaKnown RBP14.17□□□□□ -0.14
SCAF11-208ENST00000546534 MBTD1Q05BQ5 628 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 HSP90AA2PQ14568 343 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-208ENST00000546534 XKR9Q5GH70 373 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 CDR2LQ86X02 465 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-208ENST00000546534 CEP57Q86XR8 500 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 C4orf19Q8IY42 314 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 HACE1Q8IYU2 909 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 BLIDQ8IZY5 108 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 LNX1Q8TBB1 728 aaPredicted RBP14.17□□□□□ -0.14
SCAF11-208ENST00000546534 ING5Q8WYH8 240 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 LXNQ9BS40 222 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 KCNMB3Q9NPA1 279 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 XPNPEP1Q9NQW7 623 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 RGL1Q9NZL6 768 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 PARP2Q9UGN5 583 aa14.17□□□□□ -0.14
SCAF11-208ENST00000546534 MAP1BP46821 2468 aaKnown RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 TDRD15B5MCY1 1934 aaKnown RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 SHISA7A6NL88 538 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 NPTXRO95502 500 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 CCT2P78371 535 aaKnown RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 SPEM2Q0P670 501 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 MTAPQ13126 283 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 MXD4Q14582 209 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 NPY5RQ15761 445 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 PSMD5Q16401 504 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 LPAL2Q16609 132 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 INF2Q27J81 1249 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 FAM171A1Q5VUB5 890 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 ZNF852Q6ZMS4 543 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 OTUD6AQ7L8S5 288 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 SLC7A14Q8TBB6 771 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 FAM20AQ96MK3 541 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 JAKMIP1Q96N16 626 aaKnown RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 MTRQ99707 1265 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 FAM126AQ9BYI3 521 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 PLA2G2FQ9BZM2 168 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 HEBP1Q9NRV9 189 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 DNMT3BQ9UBC3 853 aaKnown RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.16□□□□□ -0.14
SCAF11-208ENST00000546534 ZFHX4Q86UP3 3567 aa14.16□□□□□ -0.14
SCAF11-208ENST00000546534 ECI2O75521 394 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 KIF4AO95239 1232 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 POU2F2P09086 479 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 PDIA3P30101 505 aaKnown RBP14.15□□□□□ -0.14
SCAF11-208ENST00000546534 POU5F1BQ06416 359 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 ADCY1Q08828 1119 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 TUSC3Q13454 348 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 CAPSQ13938 189 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 TFDP1Q14186 410 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 EPHA7Q15375 998 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 PABPC1LQ4VXU2 614 aaKnown RBP14.15□□□□□ -0.14
SCAF11-208ENST00000546534 PPM1JQ5JR12 505 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 AXDND1Q5T1B0 1012 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-208ENST00000546534 SLC27A1Q6PCB7 646 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 FBXL16Q8N461 479 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 DAGLBQ8NCG7 672 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 MCRS1Q96EZ8 462 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 DYDC2Q96IM9 177 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 AGXT2Q9BYV1 514 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 KCNH3Q9ULD8 1083 aa14.15□□□□□ -0.14
SCAF11-208ENST00000546534 MRPS17Q9Y2R5 130 aaKnown RBP14.15□□□□□ -0.14
SCAF11-208ENST00000546534 ZMYM2Q9UBW7 1377 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 CASTOR2A6NHX0 329 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 TDGF1P13385 188 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 OR1D2P34982 312 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 CTTNQ14247 550 aaKnown RBP14.14□□□□□ -0.15
SCAF11-208ENST00000546534 UVSSAQ2YD98 709 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 BLOC1S2Q6QNY1 142 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 ZNF687Q8N1G0 1237 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 NETO1Q8TDF5 533 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 HAS1Q92839 578 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 KCNB2Q92953 911 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 CHAMP1Q96JM3 812 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 RAB23Q9ULC3 237 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 MRPS23Q9Y3D9 190 aaKnown RBP14.14□□□□□ -0.15
SCAF11-208ENST00000546534 CHD8Q9HCK8 2581 aa14.14□□□□□ -0.15
SCAF11-208ENST00000546534 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
SCAF11-208ENST00000546534 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.13□□□□□ -0.15
SCAF11-208ENST00000546534 SLC30A4O14863 429 aa14.13□□□□□ -0.15
SCAF11-208ENST00000546534 RPS6KB1P23443 525 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms