RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ST6GALNAC4Q9H4F1 302 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 IFT122Q9HBG6 1241 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 ZCCHC17Q9NP64 241 aaKnown RBP12.89□□□□□ -0.35
CCDC38-202ENST00000546386 RBM12Q9NTZ6 932 aaKnown RBP12.89□□□□□ -0.35
CCDC38-202ENST00000546386 SZT2Q5T011 3432 aa12.89□□□□□ -0.35
CCDC38-202ENST00000546386 A0A0B4J269 797 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 GPR25O00155 361 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 BUB1BO60566 1050 aaPredicted RBP12.88□□□□□ -0.35
CCDC38-202ENST00000546386 SASH3O75995 380 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 CHRNB2P17787 502 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 MARCKSL1P49006 195 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 GYS2P54840 703 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 MYL6P60660 151 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 TNFAIP2Q03169 654 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 KIAA0319LQ8IZA0 1049 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 NT5C1BQ96P26 610 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 MPHOSPH6Q99547 160 aaKnown RBP12.88□□□□□ -0.35
CCDC38-202ENST00000546386 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 CACNG4Q9UBN1 327 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 JRKLQ9Y4A0 524 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 PGK1P00558 417 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 FERP16591 822 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 ALCAMQ13740 583 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 EPS8L1Q8TE68 723 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 RABGGTAQ92696 567 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
CCDC38-202ENST00000546386 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 KATNBL1Q9H079 304 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 CTTNBP2NLQ9P2B4 639 aa12.88□□□□□ -0.35
CCDC38-202ENST00000546386 DMGDHQ9UI17 866 aaKnown RBP12.88□□□□□ -0.35
CCDC38-202ENST00000546386 GTPBP10A4D1E9 387 aaKnown RBP12.87□□□□□ -0.35
CCDC38-202ENST00000546386 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 CEP104O60308 925 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 AOC2O75106 756 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 C22orf31O95567 290 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 GH1P01241 217 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 CYP11B1P15538 503 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 MESDQ14696 234 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 PAPD7Q5XG87 772 aaKnown RBP12.87□□□□□ -0.35
CCDC38-202ENST00000546386 RASAL3Q86YV0 1011 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 AFAP1L1Q8TED9 768 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 OSMRQ99650 979 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
CCDC38-202ENST00000546386 NUCKS1Q9H1E3 243 aaKnown RBP12.87□□□□□ -0.35
CCDC38-202ENST00000546386 POLIQ9UNA4 740 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 NR2E1Q9Y466 385 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 PPFIA1Q13136 1202 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 NFIL3Q16649 462 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 ATF7IP2Q5U623 682 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 ANKRD23Q86SG2 305 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 VPS36Q86VN1 386 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 TIPINQ9BVW5 301 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 TSGA10Q9BZW7 698 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 C17orf75Q9HAS0 396 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 LOC285556D6RIA3 1793 aa12.87□□□□□ -0.35
CCDC38-202ENST00000546386 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
CCDC38-202ENST00000546386 MYL3P08590 195 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 ITGA4P13612 1032 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 GJC1P36383 396 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 NCOA4Q13772 614 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 GRB14Q14449 540 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 AMHR2Q16671 573 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 CYFIP2Q96F07 1278 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 C1orf112Q9NSG2 853 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 KLK14Q9P0G3 267 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 PCDHB4Q9Y5E5 795 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 CNTNAP2Q9UHC6 1331 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 MEFVO15553 781 aaPredicted RBP12.86□□□□□ -0.35
CCDC38-202ENST00000546386 C4BPAP04003 597 aaKnown RBP12.86□□□□□ -0.35
CCDC38-202ENST00000546386 MMP3P08254 477 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 NFICP08651 508 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 RFC5P40937 340 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 FMO1Q01740 532 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 LAMC2Q13753 1193 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 GRIK4Q16099 956 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 FAM110CQ1W6H9 321 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 IER5Q5VY09 327 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 PEX26Q7Z412 305 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 CEP112Q8N8E3 955 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 DNAJB3Q8WWF6 145 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 CTNNBL1Q8WYA6 563 aaPredicted RBP12.86□□□□□ -0.35
CCDC38-202ENST00000546386 FAM118BQ9BPY3 351 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
CCDC38-202ENST00000546386 GABRQQ9UN88 632 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 ARID2Q68CP9 1835 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 KAT6AQ92794 2004 aa12.86□□□□□ -0.35
CCDC38-202ENST00000546386 O00370 1275 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
CCDC38-202ENST00000546386 TREHO43280 583 aa12.85□□□□□ -0.35
CCDC38-202ENST00000546386 HBP1O60381 514 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms