RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 DYDC2Q96IM9 177 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 NUDCD1Q96RS6 583 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 FIZ1Q96SL8 496 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 TUFT1Q9NNX1 390 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
SRP54-202ENST00000546080 CHST7Q9NS84 486 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 CHKBQ9Y259 395 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 LRRD1A4D1F6 860 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 DPPA5A6NC42 116 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 SORBS3O60504 671 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 FOSP01100 380 aaPredicted RBP15.15■□□□□ 0.02
SRP54-202ENST00000546080 FESP07332 822 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 IVDP26440 423 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 ADCY8P40145 1251 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 DLG4P78352 724 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 LMNB2Q03252 620 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 DNAJC3Q13217 504 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 STAT4Q14765 748 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 TSNAXIP1Q2TAA8 658 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 USH1GQ495M9 461 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 NSMFQ6X4W1 530 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 LONP2Q86WA8 852 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 SLC9A9Q8IVB4 645 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 MAIP1Q8WWC4 291 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 ATG4AQ8WYN0 398 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 AMNQ9BXJ7 453 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 UVRAGQ9P2Y5 699 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 GTF3C4Q9UKN8 822 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 PHTF1Q9UMS5 762 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 ABLIM1O14639 778 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 CHMP2AO43633 222 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 AHCYL1O43865 530 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 PDHA1P08559 390 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 CIITAP33076 1130 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 VPS41P49754 854 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 RASSF2P50749 326 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 RNASELQ05823 741 aaKnown RBP15.14■□□□□ 0.01
SRP54-202ENST00000546080 CMPK2Q5EBM0 449 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 CYP2W1Q8TAV3 490 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 DCAF4Q8WV16 495 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 PWWP2AQ96N64 755 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 KIAA1683Q9H0B3 1180 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 GGA1Q9UJY5 639 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 NOCTQ9UK39 431 aaKnown RBP15.14■□□□□ 0.01
SRP54-202ENST00000546080 SPATA31A5Q5VU36 1347 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 SPATA31A6Q5VVP1 1343 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 SPATA31A7Q8IWB4 1347 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 GSTTP1A0A1W2PQM5 241 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 ZBTB39O15060 712 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 ATP2B4P23634 1241 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 ALDH3A1P30838 453 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 WDR4P57081 412 aaKnown RBP15.14■□□□□ 0.01
SRP54-202ENST00000546080 SNAP25P60880 206 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 MXRA7P84157 204 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 RBBP5Q15291 538 aaKnown RBP15.14■□□□□ 0.01
SRP54-202ENST00000546080 WASHC2DQ5SRD0 308 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 THEMIS2Q5TEJ8 643 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 ZNF449Q6P9G9 518 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 KIAA0825Q8IV33 1275 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 RIBC1Q8N443 379 aaPredicted RBP15.14■□□□□ 0.01
SRP54-202ENST00000546080 ENDOVQ8N8Q3 282 aaKnown RBP15.14■□□□□ 0.01
SRP54-202ENST00000546080 KAT5Q92993 513 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 TSC22D3Q99576 134 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 TBC1D10AQ9BXI6 508 aa15.14■□□□□ 0.01
SRP54-202ENST00000546080 COL16A1Q07092 1604 aaPredicted RBP15.13■□□□□ 0.01
SRP54-202ENST00000546080 P4HA2O15460 535 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 SPAG7O75391 227 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 SLITRK3O94933 977 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 UPP2O95045 317 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 SNUPNO95149 360 aaKnown RBP15.13■□□□□ 0.01
SRP54-202ENST00000546080 ASMTLO95671 621 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 ACADSP16219 412 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 GM2AP17900 193 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 EPHB2P29323 1055 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 GCLMP48507 274 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 VAMP7P51809 220 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 PPP3CAQ08209 521 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 RASA3Q14644 834 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 EPC2Q52LR7 807 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 SLFN13Q68D06 897 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.13■□□□□ 0.01
SRP54-202ENST00000546080 ASAP3Q8TDY4 903 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 C9orf72Q96LT7 481 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 PCIF1Q9H4Z3 704 aa15.13■□□□□ 0.01
SRP54-202ENST00000546080 H0Y3Z8 333 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 MAGEB2O15479 319 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 CYP26A1O43174 497 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 SMIM24O75264 130 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 RPS6KA4O75676 772 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 HLA-DOAP06340 250 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 INHBEP58166 350 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 FMO1Q01740 532 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 MOGSQ13724 837 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 SPARCL1Q14515 664 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 GRIPAP1Q4V328 841 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 TMEM63BQ5T3F8 832 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 SLC30A9Q6PML9 568 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 SLC47A2Q86VL8 602 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 FBXO11Q86XK2 927 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms