RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 SNW1Q13573 536 aaKnown RBP19.03■□□□□ 0.64
CD9-211ENST00000546073 SURF1Q15526 300 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 CLEC17AQ6ZS10 378 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 ZNF280BQ86YH2 543 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 CACTINQ8WUQ7 758 aaKnown RBP19.03■□□□□ 0.64
CD9-211ENST00000546073 PPM1EQ8WY54 764 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 HPS3Q969F9 1004 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 KIF12Q96FN5 646 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 SNX27Q96L92 541 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 FAM213AQ9BRX8 229 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 STRA6Q9BX79 667 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 TLR9Q9NR96 1032 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 PRG3Q9Y2Y8 225 aaPredicted RBP19.03■□□□□ 0.64
CD9-211ENST00000546073 STYXL1Q9Y6J8 313 aa19.03■□□□□ 0.64
CD9-211ENST00000546073 SMIM28A0A1B0GU29 152 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 ZNF233A6NK53 670 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 NT5C1B-RDH14C9J2C7 533 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 ANKRD63C9JTQ0 380 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 NRP1O14786 923 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 NCK2O43639 380 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 EXTL3O43909 919 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 DDHD2O94830 711 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 ITGB1P05556 798 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 RPL13P26373 211 aaKnown RBP19.02■□□□□ 0.64
CD9-211ENST00000546073 SLC11A1P49279 550 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 PNOCQ13519 176 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 COLGALT2Q8IYK4 626 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 SLC39A11Q8N1S5 342 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 GPD1LQ8N335 351 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 CEP120Q8N960 986 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 BEST2Q8NFU1 509 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 IGSF21Q96ID5 467 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 TSG101Q99816 390 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 ASB7Q9H672 318 aa19.02■□□□□ 0.64
CD9-211ENST00000546073 UBQLN1Q9UMX0 589 aaKnown RBP19.02■□□□□ 0.64
CD9-211ENST00000546073 KLRC4O43908 158 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 CSPG5O95196 566 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 PRR29P0C7W0 189 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 SRGAP2BP0DMP2 458 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 CXCL8P10145 99 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 KCNE1P15382 129 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 POU3F3P20264 500 aaPredicted RBP19.01■□□□□ 0.63
CD9-211ENST00000546073 RPL9P32969 192 aaKnown RBP19.01■□□□□ 0.63
CD9-211ENST00000546073 ACOT2P49753 483 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 KCNA1Q09470 495 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 STK4Q13043 487 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 SEZ6Q53EL9 994 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 GLRA4Q5JXX5 417 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 DCLRE1AQ6PJP8 1040 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 EPM2AIP1Q7L775 607 aaPredicted RBP19.01■□□□□ 0.63
CD9-211ENST00000546073 USP37Q86T82 979 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 MAFAQ8NHW3 353 aaPredicted RBP19.01■□□□□ 0.63
CD9-211ENST00000546073 SPPL3Q8TCT6 385 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 SCFD1Q8WVM8 642 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 PCIF1Q9H4Z3 704 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 NSUN3Q9H649 340 aaKnown RBP19.01■□□□□ 0.63
CD9-211ENST00000546073 CNTN3Q9P232 1028 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 DNAJB4Q9UDY4 337 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 CPSF3Q9UKF6 684 aaKnown RBP19.01■□□□□ 0.63
CD9-211ENST00000546073 DERAQ9Y315 318 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 NUB1Q9Y5A7 615 aa19.01■□□□□ 0.63
CD9-211ENST00000546073 CASTOR2A6NHX0 329 aa19■□□□□ 0.63
CD9-211ENST00000546073 ABLIM1O14639 778 aa19■□□□□ 0.63
CD9-211ENST00000546073 GRM6O15303 877 aa19■□□□□ 0.63
CD9-211ENST00000546073 EXOC3O60645 756 aa19■□□□□ 0.63
CD9-211ENST00000546073 PBX3P40426 434 aa19■□□□□ 0.63
CD9-211ENST00000546073 EHHADHQ08426 723 aa19■□□□□ 0.63
CD9-211ENST00000546073 SMC1AQ14683 1233 aaKnown RBP19■□□□□ 0.63
CD9-211ENST00000546073 CCDC85BQ15834 202 aaPredicted RBP19■□□□□ 0.63
CD9-211ENST00000546073 BMT2Q1RMZ1 405 aa19■□□□□ 0.63
CD9-211ENST00000546073 DDX53Q86TM3 631 aaKnown RBP19■□□□□ 0.63
CD9-211ENST00000546073 NT5DC4Q86YG4 428 aa19■□□□□ 0.63
CD9-211ENST00000546073 VPS52Q8N1B4 723 aa19■□□□□ 0.63
CD9-211ENST00000546073 XXYLT1Q8NBI6 393 aa19■□□□□ 0.63
CD9-211ENST00000546073 FNBP1Q96RU3 617 aa19■□□□□ 0.63
CD9-211ENST00000546073 TCF25Q9BQ70 676 aa19■□□□□ 0.63
CD9-211ENST00000546073 MIOSQ9NXC5 875 aa19■□□□□ 0.63
CD9-211ENST00000546073 RBAKQ9NYW8 714 aaPredicted RBP19■□□□□ 0.63
CD9-211ENST00000546073 FRMD4BQ9Y2L6 1034 aa19■□□□□ 0.63
CD9-211ENST00000546073 PCDHA5Q9Y5H7 936 aa19■□□□□ 0.63
CD9-211ENST00000546073 MTCH2Q9Y6C9 303 aa19■□□□□ 0.63
CD9-211ENST00000546073 MYH11P35749 1972 aa19■□□□□ 0.63
CD9-211ENST00000546073 SF3B1O75533 1304 aaKnown RBP eCLIP19■□□□□ 0.63
CD9-211ENST00000546073 ARHGEF37A1IGU5 675 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 EPOPA6NHQ4 379 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 LACTBL1A8MY62 500 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 PDXKO00764 312 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 B3GAT3O94766 335 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 URODP06132 367 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 PTMSP20962 102 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 PAX3P23760 479 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 CYP2J2P51589 502 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 AFF1P51825 1210 aaKnown RBP18.99■□□□□ 0.63
CD9-211ENST00000546073 DSC1Q08554 894 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 TMEM132DQ14C87 1099 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 SLC10A6Q3KNW5 377 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 ZNF658Q5TYW1 1059 aaPredicted RBP18.99■□□□□ 0.63
CD9-211ENST00000546073 PDXDC1Q6P996 788 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 ELMSAN1Q6PJG2 1045 aa18.99■□□□□ 0.63
CD9-211ENST00000546073 SPRED2Q7Z698 418 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms