RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CA14Q9ULX7 337 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 TRIM33Q9UPN9 1127 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.7□□□□□ -1.66
SNHG1-220ENST00000544550 LCTP09848 1927 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 IGSF9BQ9UPX0 1349 aa4.7□□□□□ -1.66
SNHG1-220ENST00000544550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-220ENST00000544550 TMEM8BA6NDV4 472 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 M0R2C6 588 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 PIK3R2O00459 728 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 FIBPO43427 364 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 OIP5O43482 229 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 ORC4O43929 436 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 ALBP02768 609 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 WEE2P0C1S8 567 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 NT5C2P49902 561 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 RACK1P63244 317 aaKnown RBP4.69□□□□□ -1.66
SNHG1-220ENST00000544550 SP2Q02086 613 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 GHRHRQ02643 423 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 PPP2R5DQ14738 602 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 PGM5Q15124 567 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 PTPN14Q15678 1187 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 GRIK4Q16099 956 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 LETM2Q2VYF4 491 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 ZNF394Q53GI3 561 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 UTP14CQ5TAP6 766 aaKnown RBP4.69□□□□□ -1.66
SNHG1-220ENST00000544550 IL31Q6EBC2 164 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 LAIR1Q6GTX8 287 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 DCLRE1AQ6PJP8 1040 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 KCNT2Q6UVM3 1135 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 CYP26C1Q6V0L0 522 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 CYFIP1Q7L576 1253 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 GPR149Q86SP6 731 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 RTN4RL1Q86UN2 441 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-220ENST00000544550 ABI1Q8IZP0 508 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 NME8Q8N427 588 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 ZBTB44Q8NCP5 570 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 NUDT8Q8WV74 236 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 EDARADDQ8WWZ3 215 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 RSPH1Q8WYR4 309 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 TBC1D5Q92609 795 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 SENP7Q9BQF6 1050 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 AMNQ9BXJ7 453 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 OSBPL6Q9BZF3 934 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 LACRTQ9GZZ8 138 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 TMEM117Q9H0C3 514 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 CWH43Q9H720 699 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 RGS18Q9NS28 235 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 TOMM22Q9NS69 142 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 ECHDC1Q9NTX5 307 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 SPATA6Q9NWH7 488 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-220ENST00000544550 DPP7Q9UHL4 492 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 ANAPC4Q9UJX5 808 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 TNNQ9UQP3 1299 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 PCDHA1Q9Y5I3 950 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 CACNA1BQ00975 2339 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 KDM3AQ9Y4C1 1321 aa4.69□□□□□ -1.66
SNHG1-220ENST00000544550 PTPRZ1P23471 2315 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 BAZ2AQ9UIF9 1905 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 MYH4Q9Y623 1939 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 KANSL1LA0AUZ9 987 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 GCOM1H8Y6P7 765 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 RBAK-RBAKDNI3L0D1 243 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ENC1O14682 589 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 NCAM2O15394 837 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 NARSO43776 548 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 DHX16O60231 1041 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 LILRB5O75023 590 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 FBXO24O75426 580 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 RPS6KA5O75582 802 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CXCL14O95715 111 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 RETP07949 1114 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 FGRP09769 529 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 POLR2MP0CAP2 368 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 PCP11498 1178 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 RLBP1P12271 317 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 IBSPP21815 317 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 TGM1P22735 817 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CDC27P30260 824 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 GBP2P32456 591 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ALDH7A1P49419 539 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 GATMP50440 423 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 STARD6P59095 220 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 PRKCQQ04759 706 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CSTF1Q05048 431 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 PCDH1Q08174 1060 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ZNF423Q2M1K9 1284 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 QRICH1Q2TAL8 776 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ASPRV1Q53RT3 343 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CCDC178Q5BJE1 867 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 RRP12Q5JTH9 1297 aaKnown RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ZMYM1Q5SVZ6 1142 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 FAM102BQ5T8I3 360 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 RSPO2Q6UXX9 243 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 TMC5Q6UXY8 1006 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 CHSY3Q70JA7 882 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 NLRX1Q86UT6 975 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ADGRF4Q8IZF3 695 aa4.68□□□□□ -1.66
SNHG1-220ENST00000544550 MAML2Q8IZL2 1156 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-220ENST00000544550 ZNF654Q8IZM8 581 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms