RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 PCDHA13Q9Y5I0 950 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 MYBBP1AQ9BQG0 1328 aaKnown RBP3.07□□□□□ -1.92
YBX3-214ENST00000544501 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 CXorf49A8MYA2 514 aaPredicted RBP3.06□□□□□ -1.92
YBX3-214ENST00000544501 NCANO14594 1321 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 PRRG2O14669 202 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 ARIH2O95376 493 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 ADRB1P08588 477 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 HMGB1P09429 215 aaKnown RBP3.06□□□□□ -1.92
YBX3-214ENST00000544501 ATP5JP18859 108 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 ALDH1A3P47895 512 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 XDHP47989 1333 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 CTXN1P60606 82 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 IL10RAQ13651 578 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 CNGB1Q14028 1251 aaPredicted RBP3.06□□□□□ -1.92
YBX3-214ENST00000544501 PPP2R5AQ15172 486 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 CDSNQ15517 529 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 FAM102BQ5T8I3 360 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 C1QL3Q5VWW1 255 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 AFMIDQ63HM1 303 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 EFCAB12Q6NXP0 572 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 SEM1Q6ZVN7 128 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 TMPRSS6Q8IU80 811 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 PLXDC1Q8IUK5 500 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 IFI44Q8TCB0 444 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 C1GALT1C1Q96EU7 318 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 MRGPRX4Q96LA9 322 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 MAP3K14Q99558 947 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 MNTQ99583 582 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 MRI1Q9BV20 369 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 GPR87Q9BY21 358 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 CPEB1Q9BZB8 566 aaKnown RBP3.06□□□□□ -1.92
YBX3-214ENST00000544501 POLHQ9Y253 713 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 PCDHB1Q9Y5F3 818 aa3.06□□□□□ -1.92
YBX3-214ENST00000544501 PNPLA7Q6ZV29 1317 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 KLRG2A4D1S0 409 aaPredicted RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 DIRC3C9JPN6 131 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 TSPAN6O43657 245 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 OFD1O75665 1012 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 POMCP01189 267 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 AMHP03971 560 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 FTH1P19P0C7X4 201 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 RAP2AP10114 183 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 ALAS1P13196 640 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 HSPA6P17066 643 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 FPR1P21462 350 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 LPOP22079 712 aaPredicted RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 PCSK1P29120 753 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 IL12RB1P42701 662 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 FXR1P51114 621 aaKnown RBP eCLIP3.05□□□□□ -1.92
YBX3-214ENST00000544501 SCNN1GP51170 649 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 DSC2Q02487 901 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 CREMQ03060 361 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 TLE1Q04724 770 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 TARDBPQ13148 414 aaKnown RBP eCLIP3.05□□□□□ -1.92
YBX3-214ENST00000544501 CRHR2Q13324 411 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 RRP1BQ14684 758 aaKnown RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 UBXN2BQ14CS0 331 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 PGS1Q32NB8 556 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 ATXN7L2Q5T6C5 722 aaPredicted RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 ANKS6Q68DC2 871 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 Q6ZRM9 215 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 XYLT1Q86Y38 959 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 RAVER1Q8IY67 606 aaKnown RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 TCEAL8Q8IYN2 117 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 ZGPATQ8N5A5 531 aaKnown RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 MB21D1Q8N884 522 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 C3orf20Q8ND61 904 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 NLGN4YQ8NFZ3 816 aaPredicted RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 SLC35B2Q8TB61 432 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 STON2Q8WXE9 905 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 TFAP2CQ92754 450 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 HPS3Q969F9 1004 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 MVB12AQ96EY5 273 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 TMX3Q96JJ7 454 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 CLPTM1LQ96KA5 538 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 FAM167AQ96KS9 214 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 DMRTA2Q96SC8 542 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 DCLRE1CQ96SD1 692 aaKnown RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 GTPBP4Q9BZE4 634 aaKnown RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 C11orf54Q9H0W9 315 aaPredicted RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 SLC12A5Q9H2X9 1139 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 LDAHQ9H6V9 325 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 SPON1Q9HCB6 807 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 NMRK2Q9NPI5 230 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 KMT5AQ9NQR1 393 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 KLHL42Q9P2K6 505 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 SLC23A1Q9UHI7 598 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 G3BP2Q9UN86 482 aaKnown RBP3.05□□□□□ -1.92
YBX3-214ENST00000544501 ACTL7AQ9Y615 435 aa3.05□□□□□ -1.92
YBX3-214ENST00000544501 GOLGA6CA6NDK9 693 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 GOLGA6BA6NDN3 693 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 DRGXA6NNA5 263 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 WNT10BO00744 389 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 TRIM24O15164 1050 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 RECQL4O94761 1208 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 SCGB1D2O95969 90 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 PEX11BO96011 259 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 GOLGA6DP0CG33 693 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 MTHFD1P11586 935 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms