RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 ATAT1Q5SQI0 421 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 CD300LGQ6UXG3 332 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 ALKAL1Q6UXT8 129 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 AK8Q96MA6 479 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 NECTIN4Q96NY8 510 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 C17orf75Q9HAS0 396 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 MAN1C1Q9NR34 630 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 TGM5O43548 720 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 RFPL2O75678 378 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 ADH1AP07327 375 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 HARSP12081 509 aaKnown RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 PDCP20941 246 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 LONP1P36776 959 aaKnown RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 MTHFRP42898 656 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 CLCNKBP51801 687 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 SOX4Q06945 474 aaPredicted RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 MCM6Q14566 821 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 FAM171A1Q5VUB5 890 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 GPR149Q86SP6 731 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 KCTD17Q8N5Z5 321 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 EPSTI1Q96J88 318 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 RIPOR3Q96MK2 946 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 ZMAT2Q96NC0 199 aaKnown RBP11.75□□□□□ -0.53
CHEK1-218ENST00000544373 REEP2Q9BRK0 252 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 TCHPQ9BT92 498 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 TIPINQ9BVW5 301 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 SFXN1Q9H9B4 322 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 MTMR6Q9Y217 621 aa11.75□□□□□ -0.53
CHEK1-218ENST00000544373 PIEZO1Q92508 2521 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 BMP15O95972 392 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 GLUD1P00367 558 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 CD44P16070 742 aaKnown RBP11.74□□□□□ -0.53
CHEK1-218ENST00000544373 GRM5P41594 1212 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 XKR4Q5GH76 650 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 LILRA6Q6PI73 481 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 MPZL3Q6UWV2 235 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 TRIM67Q6ZTA4 783 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 CEP57Q86XR8 500 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 TMEM130Q8N3G9 435 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 LNX1Q8TBB1 728 aaPredicted RBP11.74□□□□□ -0.53
CHEK1-218ENST00000544373 CALML4Q96GE6 196 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 CLIC6Q96NY7 704 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 CLSTN3Q9BQT9 956 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 TTPALQ9BTX7 342 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 HAPLN2Q9GZV7 340 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 SMOC2Q9H3U7 446 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 SSX2IPQ9Y2D8 614 aa11.74□□□□□ -0.53
CHEK1-218ENST00000544373 SF3B1O75533 1304 aaKnown RBP eCLIP11.73□□□□□ -0.538e-6■■■■■ 107
CHEK1-218ENST00000544373 I3L4J1 428 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 K7ELQ4 463 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-218ENST00000544373 ADAM12O43184 909 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 B3GAT3O94766 335 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 BRD1O95696 1058 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 ASGR2P07307 311 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 MCF2P10911 925 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 SMTNP53814 917 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 UPP1Q16831 310 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 RAD54LQ92698 747 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 C18orf25Q96B23 403 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-218ENST00000544373 ZNF707Q96C28 371 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-218ENST00000544373 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
CHEK1-218ENST00000544373 SNX27Q96L92 541 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 CCDC94Q9BW85 323 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-218ENST00000544373 KCND2Q9NZV8 630 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 ANKFY1Q9P2R3 1169 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 LIMD1Q9UGP4 676 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 FBXO2Q9UK22 296 aaPredicted RBP11.73□□□□□ -0.53
CHEK1-218ENST00000544373 NR2E1Q9Y466 385 aa11.73□□□□□ -0.53
CHEK1-218ENST00000544373 DMDP11532 3685 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 CCDC195A0A1B0GUA6 201 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 TOM1L1O75674 476 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 BRCC3P46736 316 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 YARSP54577 528 aaKnown RBP11.72□□□□□ -0.53
CHEK1-218ENST00000544373 NCKAP1LP55160 1127 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 STRN3Q13033 797 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 RSPO2Q6UXX9 243 aaPredicted RBP11.72□□□□□ -0.53
CHEK1-218ENST00000544373 HAUS6Q7Z4H7 955 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 APBB1IPQ7Z5R6 666 aaPredicted RBP11.72□□□□□ -0.53
CHEK1-218ENST00000544373 GPR65Q8IYL9 337 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 KREMEN2Q8NCW0 462 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 RASSF8Q8NHQ8 419 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 ACAP3Q96P50 834 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHEK1-218ENST00000544373 FNIP2Q9P278 1114 aa11.72□□□□□ -0.53
CHEK1-218ENST00000544373 TMEM221A6NGB7 291 aa11.71□□□□□ -0.53
CHEK1-218ENST00000544373 M0R296 226 aa11.71□□□□□ -0.53
CHEK1-218ENST00000544373 SLC26A4O43511 780 aa11.71□□□□□ -0.53
CHEK1-218ENST00000544373 N4BP1O75113 896 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms