RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 SPATA21Q7Z572 469 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 KIF1BO60333 1816 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
PCDH9-204ENST00000544246 SRGAP2O75044 1071 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 FYNP06241 537 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 ADORA2BP29275 332 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 SOAT1P35610 550 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 KRR1Q13601 381 aaKnown RBP10.95□□□□□ -0.66
PCDH9-204ENST00000544246 NCAPHQ15003 741 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 WLSQ5T9L3 541 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 NLGN1Q8N2Q7 840 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 LEMD3Q9Y2U8 911 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 PNMA6FA0A0J9YX94 578 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 ATP9BO43861 1147 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 KCNQ4P56696 695 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 RASGRF1Q13972 1273 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 C6orf10Q5SRN2 563 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 IZUMO3Q5VZ72 239 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 SH3BP5LQ7L8J4 393 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 P3H2Q8IVL5 708 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 ELMO2Q96JJ3 720 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 PALD1Q9ULE6 856 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 CDYLQ9Y232 598 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 SOX6P35712 828 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 BTBD8Q5XKL5 378 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 TTC39CQ8N584 583 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 PIK3R5Q8WYR1 880 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 SIKE1Q9BRV8 207 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 DHX35Q9H5Z1 703 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 UVRAGQ9P2Y5 699 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 SLC9A2Q9UBY0 812 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 ANO9A1A5B4 782 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 PCCAP05165 728 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 APOA4P06727 396 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 GNA15P30679 374 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 IL13P35225 146 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 TAP1Q03518 808 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 GFPT1Q06210 699 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 USP39Q53GS9 565 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 TWF2Q6IBS0 349 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 CC2D1AQ6P1N0 951 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 TMEM154Q6P9G4 183 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 PRUNE1Q86TP1 453 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 GSPT2Q8IYD1 628 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 KCNK16Q96T55 309 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 CCT7Q99832 543 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 DOLKQ9UPQ8 538 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 ABCC4O15439 1325 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 CYBBP04839 570 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 MAPK6Q16659 721 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 RCSD1Q6JBY9 416 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 PCYOX1LQ8NBM8 494 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 NSUN7Q8NE18 718 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 UTP6Q9NYH9 597 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 ADAM21Q9UKJ8 722 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 GDAQ9Y2T3 454 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 MYCP01106 439 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 ENO3P13929 434 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 TERF2Q15554 542 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 MAPRE1Q15691 268 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 AASDHQ4L235 1098 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 LRRC24Q50LG9 513 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 C11orf74Q86VG3 221 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 RHOT1Q8IXI2 618 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 LINC00301Q8NCQ3 95 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 PRMT1Q99873 361 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 DHX36Q9H2U1 1008 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 TAF1DQ9H5J8 278 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 EIF2AK2P19525 551 aaKnown RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 SLC16A1P53985 500 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 PLOD1Q02809 727 aaPredicted RBP10.94□□□□□ -0.66
PCDH9-204ENST00000544246 COBLL1Q53SF7 1204 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 MICU2Q8IYU8 434 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 RNPEPQ9H4A4 650 aa10.94□□□□□ -0.66
PCDH9-204ENST00000544246 SFI1A8K8P3 1242 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 STAT4Q14765 748 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CENPTQ96BT3 561 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PARVBQ9HBI1 364 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ZFATQ9P243 1243 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 TJP2Q9UDY2 1190 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 STRNO43815 780 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 VEPH1Q14D04 833 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 SLC30A9Q6PML9 568 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 DTX3LQ8TDB6 740 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 MXD3Q9BW11 206 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PLEKHA5Q9HAU0 1116 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 C20orf96Q9NUD7 363 aaPredicted RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 ARL2BPQ9Y2Y0 163 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PTPRTO14522 1441 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 NR3C1P04150 777 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 SERPINB3P29508 390 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 HOXA13P31271 388 aaPredicted RBP10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PLA2G4AP47712 749 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 PRELPP51888 382 aa10.93□□□□□ -0.66
PCDH9-204ENST00000544246 CSTF3Q12996 717 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms