RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ABLIM1O14639 778 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 CLDN3O15551 220 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 C1RP00736 705 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 KLRC2P26717 231 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 NAB2Q15742 525 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 KYAT1Q16773 422 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 XKR4Q5GH76 650 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 KIAA0319Q5VV43 1072 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 SYCE2Q6PIF2 218 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 SV2BQ7L1I2 683 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 ZBTB33Q86T24 672 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 SLC22A17Q8WUG5 538 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 BICD1Q96G01 975 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 NECTIN4Q96NY8 510 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 KLHL5Q96PQ7 755 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 PPP1R10Q96QC0 940 aaKnown RBP25.46■■□□□ 1.67
CHFR-222ENST00000544093 C1QTNF1Q9BXJ1 281 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 S1PR5Q9H228 398 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 ZHX3Q9H4I2 956 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 ANKFY1Q9P2R3 1169 aa25.46■■□□□ 1.67
CHFR-222ENST00000544093 CASTOR2A6NHX0 329 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 F13A1P00488 732 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 CNPP09543 421 aaKnown RBP25.45■■□□□ 1.66
CHFR-222ENST00000544093 MCL1Q07820 350 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 CBX2Q14781 532 aaPredicted RBP25.45■■□□□ 1.66
CHFR-222ENST00000544093 ALKAL1Q6UXT8 129 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 PHF7Q9BWX1 381 aaPredicted RBP25.45■■□□□ 1.66
CHFR-222ENST00000544093 ADAM7Q9H2U9 754 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 RXFP1Q9HBX9 757 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 CD320Q9NPF0 282 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 TBX20Q9UMR3 447 aa25.45■■□□□ 1.66
CHFR-222ENST00000544093 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.45■■□□□ 1.66
CHFR-222ENST00000544093 TMEM189-UBE2V1I3L0A0 370 aa25.44■■□□□ 1.66
CHFR-222ENST00000544093 HNRNPDLO14979 420 aaKnown RBP25.44■■□□□ 1.66
CHFR-222ENST00000544093 STAT6P42226 847 aa25.44■■□□□ 1.66
CHFR-222ENST00000544093 LIG4P49917 911 aa25.44■■□□□ 1.66
CHFR-222ENST00000544093 CEP120Q8N960 986 aa25.44■■□□□ 1.66
CHFR-222ENST00000544093 DDX27Q96GQ7 796 aaKnown RBP25.44■■□□□ 1.66
CHFR-222ENST00000544093 GPR62Q9BZJ7 368 aa25.44■■□□□ 1.66
CHFR-222ENST00000544093 ST6GALNAC4Q9H4F1 302 aa25.44■■□□□ 1.66
CHFR-222ENST00000544093 SEL1LQ9UBV2 794 aa25.44■■□□□ 1.66
CHFR-222ENST00000544093 SMIM28A0A1B0GU29 152 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 F8W810 466 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 C2CD2LO14523 706 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 PIGRP01833 764 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 ALADP13716 330 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 KCNE1P15382 129 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 MATR3P43243 847 aaKnown RBP eCLIP25.43■■□□□ 1.66
CHFR-222ENST00000544093 CLCN4P51793 760 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 OSTNP61366 133 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 PDXDC1Q6P996 788 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 TAS1R1Q7RTX1 841 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 KCNG4Q8TDN1 519 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 SNX27Q96L92 541 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 CNTN3Q9P232 1028 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 FNIP2Q9P278 1114 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 CFAP45Q9UL16 551 aa25.43■■□□□ 1.66
CHFR-222ENST00000544093 KIF4AO95239 1232 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 HARSP12081 509 aaKnown RBP25.42■■□□□ 1.66
CHFR-222ENST00000544093 EPCAMP16422 314 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 GAP43P17677 238 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 GTF2BQ00403 316 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 GLRA4Q5JXX5 417 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 DCLRE1AQ6PJP8 1040 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 DDX12PQ92771 950 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 HVCN1Q96D96 273 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 FBXL18Q96ME1 805 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 RIPOR3Q96MK2 946 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 PAAF1Q9BRP4 392 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 LRRC27Q9C0I9 530 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 SFXN1Q9H9B4 322 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 PLEKHA5Q9HAU0 1116 aa25.42■■□□□ 1.66
CHFR-222ENST00000544093 TFIP11Q9UBB9 837 aaKnown RBP25.42■■□□□ 1.66
CHFR-222ENST00000544093 PI4K2BG5E9Z4 385 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 TEX28O15482 410 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 TRAPPC3O43617 180 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 CUTAO60888 179 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 MTHFRP42898 656 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 ZBTB45Q96K62 511 aaPredicted RBP25.41■■□□□ 1.66
CHFR-222ENST00000544093 TTPALQ9BTX7 342 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 CXCL16Q9H2A7 254 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 CUEDC2Q9H467 287 aa25.41■■□□□ 1.66
CHFR-222ENST00000544093 SPDYE4A6NLX3 237 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 LOC730098B7Z3J9 87 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 B3GAT3O94766 335 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 GLUD1P00367 558 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 CLTAP09496 248 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 UPP1Q16831 310 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 DYMQ7RTS9 669 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 MAP4K3Q8IVH8 894 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 HDAC7Q8WUI4 952 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 RIN2Q8WYP3 895 aaPredicted RBP25.4■■□□□ 1.66
CHFR-222ENST00000544093 RABGGTAQ92696 567 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 TSPAN18Q96SJ8 248 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 FIZ1Q96SL8 496 aa25.4■■□□□ 1.66
CHFR-222ENST00000544093 PDCD11Q14690 1871 aaKnown RBP25.4■■□□□ 1.66
CHFR-222ENST00000544093 RPL9P32969 192 aaKnown RBP25.39■■□□□ 1.66
CHFR-222ENST00000544093 ATAT1Q5SQI0 421 aa25.39■■□□□ 1.66
CHFR-222ENST00000544093 FAM171A1Q5VUB5 890 aa25.39■■□□□ 1.66
CHFR-222ENST00000544093 FOXD4L5Q5VV16 416 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms