RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 PCDHGA4Q9Y5G9 962 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 USP17L3A6NCW0 530 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 USP17L4A6NCW7 530 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 FSCN2O14926 492 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 CCDC166P0CW27 439 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 PIM1P11309 404 aaPredicted RBP19.44■□□□□ 0.7
CCT4-204ENST00000544079 COMTP21964 271 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 HOXD13P35453 343 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 SLC12A3P55017 1021 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 USP4Q13107 963 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 USP17L1Q7RTZ2 530 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 ARHGAP24Q8N264 748 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 LARGE2Q8N3Y3 721 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 PPP1R14BQ96C90 147 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 GALNT8Q9NY28 637 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 ASIC3Q9UHC3 531 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 KIAA1024Q9UPX6 916 aa19.44■□□□□ 0.7
CCT4-204ENST00000544079 FAM196BA6NMK8 535 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 FOXO6A8MYZ6 492 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 KRT18P05783 430 aaKnown RBP19.43■□□□□ 0.7
CCT4-204ENST00000544079 CYP19A1P11511 503 aaPredicted RBP19.43■□□□□ 0.7
CCT4-204ENST00000544079 ARSHQ5FYA8 562 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 PPP1R18Q6NYC8 613 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 ZNF444Q8N0Y2 327 aaPredicted RBP19.43■□□□□ 0.7
CCT4-204ENST00000544079 TTC25Q96NG3 672 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 AGPAT1Q99943 283 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 NDUFA13Q9P0J0 144 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 DDX25Q9UHL0 483 aaKnown RBP19.43■□□□□ 0.7
CCT4-204ENST00000544079 PCDHA12Q9UN75 941 aa19.43■□□□□ 0.7
CCT4-204ENST00000544079 TCRBV7S2A1N4TA0A589 114 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 DNAJC6O75061 913 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 PABPC4LP0CB38 370 aaKnown RBP19.42■□□□□ 0.7
CCT4-204ENST00000544079 GOLGA8HP0CJ92 632 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 TROVE2P10155 538 aaKnown RBP eCLIP19.42■□□□□ 0.7
CCT4-204ENST00000544079 KCNJ1P48048 391 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 NME8Q8N427 588 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 NSL1Q96IY1 281 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 RIOX1Q9H6W3 641 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 PPCSQ9HAB8 311 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 SLCO1B3Q9NPD5 702 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 TAS2R14Q9NYV8 317 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.42■□□□□ 0.7
CCT4-204ENST00000544079 NPHP3-ACAD11A0A0J9YXS1 232 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 EXOC3O60645 756 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 CYP1A1P04798 512 aaPredicted RBP19.42■□□□□ 0.7
CCT4-204ENST00000544079 USP17L8P0C7I0 530 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
CCT4-204ENST00000544079 CASP5P51878 434 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 ITGA8P53708 1063 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 MAP7Q14244 749 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 KRT72Q14CN4 511 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 MARK2Q7KZI7 788 aaKnown RBP19.42■□□□□ 0.7
CCT4-204ENST00000544079 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.42■□□□□ 0.72e-10■■■■■ 29.8
CCT4-204ENST00000544079 PIGSQ96S52 555 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 MKNK1Q9BUB5 465 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 EPB41L1Q9H4G0 881 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 OCEL1Q9H607 264 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 SUDS3Q9H7L9 328 aaPredicted RBP19.42■□□□□ 0.7
CCT4-204ENST00000544079 SSU72Q9NP77 194 aaKnown RBP19.42■□□□□ 0.7
CCT4-204ENST00000544079 STK32BQ9NY57 414 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 TBK1Q9UHD2 729 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 ANAPC5Q9UJX4 755 aa19.42■□□□□ 0.7
CCT4-204ENST00000544079 ASTN1O14525 1302 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 GYG2O15488 501 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 RAP1GDS1P52306 607 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 RASA2Q15283 850 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 ZC2HC1CQ53FD0 456 aaPredicted RBP19.41■□□□□ 0.7
CCT4-204ENST00000544079 SUSD4Q5VX71 490 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 OTOAQ7RTW8 1153 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 ST13P4Q8IZP2 240 aaPredicted RBP19.41■□□□□ 0.7
CCT4-204ENST00000544079 PREBQ9HCU5 417 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 BLOC1S6Q9UL45 172 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 ROBO1Q9Y6N7 1651 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 ATP9BO43861 1147 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 HAUS5O94927 633 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 GAS8O95995 478 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 IL2RBP14784 551 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 ATF2P15336 505 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 RTP1P59025 263 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 FAM91A1Q658Y4 838 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 SEPT14Q6ZU15 432 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 MTDHQ86UE4 582 aaKnown RBP19.41■□□□□ 0.7
CCT4-204ENST00000544079 PPP2R3CQ969Q6 453 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 MCUR1Q96AQ8 359 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 ANKFY1Q9P2R3 1169 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 STX8Q9UNK0 236 aa19.41■□□□□ 0.7
CCT4-204ENST00000544079 FAM163BP0C2L3 166 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 DESP17661 470 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 CHRNB2P17787 502 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 CRABP2P29373 138 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 FMO5P49326 533 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 DSG1Q02413 1049 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 TNIP1Q15025 636 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 TMED2Q15363 201 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 PARP10Q53GL7 1025 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 KBTBD2Q8IY47 623 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 SYCP3Q8IZU3 236 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 IRGQQ8WZA9 623 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 HIC2Q96JB3 615 aa19.4■□□□□ 0.7
CCT4-204ENST00000544079 FAM84BQ96KN1 310 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms