RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 TMC5Q6UXY8 1006 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TMEM87AQ8NBN3 555 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CDK5RAP3Q96JB5 506 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 REEP2Q9BRK0 252 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CCSER1Q9C0I3 900 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 HAPLN2Q9GZV7 340 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 FNIP2Q9P278 1114 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 FBXO2Q9UK22 296 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 DENND4AQ7Z401 1863 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PIEZO1Q92508 2521 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 C2CD4DB7Z1M9 353 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 K7ELQ4 463 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ADH1AP07327 375 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MCF2P10911 925 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 NCKAP1LP55160 1127 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZXDAP98168 799 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SOX4Q06945 474 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 GLRA4Q5JXX5 417 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ATAT1Q5SQI0 421 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MPZL3Q6UWV2 235 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZBTB33Q86T24 672 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CMASQ8NFW8 434 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 LNX1Q8TBB1 728 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RIN2Q8WYP3 895 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RAD54LQ92698 747 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SNX21Q969T3 373 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CALML4Q96GE6 196 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 EPSTI1Q96J88 318 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RIPOR3Q96MK2 946 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 FIZ1Q96SL8 496 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SFXN1Q9H9B4 322 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 KCNG1Q9UIX4 513 aa14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SRPRBQ9Y5M8 271 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MORC2Q9Y6X9 1032 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CITO14578 2027 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TMEM189-UBE2V1I3L0A0 370 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TOM1L1O75674 476 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 KCNE1P15382 129 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RPL17P18621 184 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SP100P23497 879 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MARCKSP29966 332 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 DDIT3P35638 169 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CLCNKBP51801 687 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SMTNP53814 917 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 OSTNP61366 133 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MCM6Q14566 821 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 UPP1Q16831 310 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZNF568Q3ZCX4 644 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PRSS55Q6UWB4 352 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZPBP2Q6X784 338 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 APBB1IPQ7Z5R6 666 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 C3orf58Q8NDZ4 430 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 HASPINQ8TF76 798 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 HDAC7Q8WUI4 952 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SNX27Q96L92 541 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CLIC6Q96NY7 704 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CLSTN3Q9BQT9 956 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MAN1C1Q9NR34 630 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ODF2LQ9ULJ1 636 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
TNFRSF1A-215ENST00000543359 DOCK6Q96HP0 2047 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ADAM12O43184 909 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TGM5O43548 720 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RFPL2O75678 378 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 GLUD1P00367 558 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SPATA31D3P0C874 917 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MCL1Q07820 350 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SLC10A6Q3KNW5 377 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 FAM171A1Q5VUB5 890 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 DCLRE1AQ6PJP8 1040 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 C15orf39Q6ZRI6 1047 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TRIM67Q6ZTA4 783 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SPATA31D4Q6ZUB0 917 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 HFE2Q6ZVN8 426 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 HAUS6Q7Z4H7 955 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PALB2Q86YC2 1186 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PIK3R5Q8WYR1 880 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZNF707Q96C28 371 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 USP28Q96RU2 1077 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TTPALQ9BTX7 342 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 USTQ9Y2C2 406 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 NR2E1Q9Y466 385 aa14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ARIH1Q9Y4X5 557 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 STX6O43752 255 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 FAM189A1O60320 539 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 FGFR3P22607 806 aa14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 DHX8Q14562 1220 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SLC39A14Q15043 492 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms