RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 RRAGAQ7L523 313 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 TTC30AQ86WT1 665 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 TSKSQ9UJT2 592 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 USP20Q9Y2K6 914 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 ERFP50548 548 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 MTMR3Q13615 1198 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.48
CDH4-201ENST00000543233 GPATCH4Q5T3I0 446 aaKnown RBP12.02□□□□□ -0.48
CDH4-201ENST00000543233 GPBP1Q86WP2 473 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 SIX5Q8N196 739 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 AZIN2Q96A70 460 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 HSPBAP1Q96EW2 488 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 ANO3Q9BYT9 981 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 PDGFDQ9GZP0 370 aaPredicted RBP12.02□□□□□ -0.48
CDH4-201ENST00000543233 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.48
CDH4-201ENST00000543233 IGKV6D-41A0A0C4DH26 115 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 SNHG28P0DPA3 235 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 EPHB2P29323 1055 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ZNF76P36508 570 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ECE1P42892 770 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 SLCO1A2P46721 670 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 TMED10P49755 219 aaKnown RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 PDE1CQ14123 709 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 PTPROQ16827 1216 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ABCB5Q2M3G0 1257 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 TDRD12Q587J7 1177 aaKnown RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 CCDC174Q6PII3 467 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 UNC13DQ70J99 1090 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 NME8Q8N427 588 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 NAT14Q8WUY8 206 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 PRPF31Q8WWY3 499 aaKnown RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 PRMT6Q96LA8 375 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 OLFM3Q96PB7 478 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 CSRNP1Q96S65 589 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 DPH5Q9H2P9 285 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 CUEDC2Q9H467 287 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 MRGBPQ9NV56 204 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 HAO1Q9UJM8 370 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 PACSIN2Q9UNF0 486 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 ESYT2A0FGR8 921 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 RGS16O15492 202 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 MAP3K7O43318 606 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ADCY3O60266 1144 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ASMTLO95671 621 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 LYNP07948 512 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 STIP1P31948 543 aaKnown RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 FLT3P36888 993 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 USP11P51784 963 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ERVK-9P63128 1117 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 CYLC2Q14093 348 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 MIIPQ5JXC2 388 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ZNF362Q5T0B9 420 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 KSR1Q8IVT5 923 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 ST13P4Q8IZP2 240 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 ANKRD42Q8N9B4 389 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDH4-201ENST00000543233 UTP4Q969X6 686 aaKnown RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 CEP295NLQ96MC4 621 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 TUBGCP5Q96RT8 1024 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 BMP2KQ9NSY1 1161 aaPredicted RBP12.02□□□□□ -0.49
CDH4-201ENST00000543233 TXLNGQ9NUQ3 528 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 PKD2L1Q9P0L9 805 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 KLHL14Q9P2G3 628 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 CAPN11Q9UMQ6 739 aa12.02□□□□□ -0.49
CDH4-201ENST00000543233 MYH7BA7E2Y1 1941 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 DLEC1Q9Y238 1755 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
CDH4-201ENST00000543233 SFI1A8K8P3 1242 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 H0YGN5 161 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 FTCDO95954 541 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 PSMC6P62333 389 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 SULT2A1Q06520 285 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 COASYQ13057 564 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 PODNQ7Z5L7 613 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 PLVAPQ9BX97 442 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
CDH4-201ENST00000543233 AZI2Q9H6S1 392 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 EURLQ9NYK6 297 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 DOLKQ9UPQ8 538 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 NFS1Q9Y697 457 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 NDUFB10O96000 172 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 CFBP00751 764 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 KPNB1Q14974 876 aaKnown RBP12.01□□□□□ -0.49
CDH4-201ENST00000543233 FAM26FQ5R3K3 315 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 TMEM214Q6NUQ4 689 aaKnown RBP12.01□□□□□ -0.49
CDH4-201ENST00000543233 PEX5LQ8IYB4 626 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 STKLD1Q8NE28 680 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 PPP2R3CQ969Q6 453 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 HAPLN3Q96S86 360 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 SYNPO2Q9UMS6 1093 aa12.01□□□□□ -0.49
CDH4-201ENST00000543233 FAF1Q9UNN5 650 aaPredicted RBP12.01□□□□□ -0.49
CDH4-201ENST00000543233 PLA2G4BP0C869 781 aa12□□□□□ -0.49
CDH4-201ENST00000543233 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.49
CDH4-201ENST00000543233 PDE1BQ01064 536 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms