RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ITIH4Q14624 930 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 PPP1R7Q15435 360 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 SNRNP35Q16560 246 aaKnown RBP17.76■□□□□ 0.43
KDM2B-216ENST00000543025 SGSM3Q96HU1 749 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 PRMT1Q99873 361 aaKnown RBP17.76■□□□□ 0.43
KDM2B-216ENST00000543025 CCPG1Q9ULG6 757 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 GOLGA8IPA6NC78 632 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 GOLGA8JA6NMD2 632 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 SLC16A4O15374 487 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 MCCD1P59942 119 aaPredicted RBP17.76■□□□□ 0.43
KDM2B-216ENST00000543025 XRCC4Q13426 336 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 MFSD5Q6N075 450 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 MIGA2Q7L4E1 593 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 PIGWQ7Z7B1 504 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 CPNE8Q86YQ8 564 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 PLCD3Q8N3E9 789 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 SLC17A8Q8NDX2 589 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 FAM151AQ8WW52 585 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 ROPN1BQ9BZX4 212 aaPredicted RBP17.76■□□□□ 0.43
KDM2B-216ENST00000543025 ROPN1Q9HAT0 212 aaPredicted RBP17.76■□□□□ 0.43
KDM2B-216ENST00000543025 AGO4Q9HCK5 861 aaKnown RBP17.76■□□□□ 0.43
KDM2B-216ENST00000543025 HAUS2Q9NVX0 235 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 SAMD15Q9P1V8 674 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 COL20A1Q9P218 1284 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 CCT8L1PA6NM43 557 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 ATP2C2O75185 946 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 DNAJC8O75937 253 aaPredicted RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 ICAM1P05362 532 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 HIRAP54198 1017 aaPredicted RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 AUHQ13825 339 aaKnown RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 FKBP1CQ5VVH2 108 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 TRMT10CQ7L0Y3 403 aaKnown RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 CBWD2Q8IUF1 395 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 SEMA4DQ92854 862 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 SLCO2A1Q92959 643 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 AGBL1Q96MI9 1066 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 SH2D3AQ9BRG2 576 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 CD248Q9HCU0 757 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 ADARB2Q9NS39 739 aaKnown RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 EXOC7Q9UPT5 735 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 TKFCQ3LXA3 575 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 CCDC25Q86WR0 208 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 CCDC50Q8IVM0 306 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 PARP9Q8IXQ6 854 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 LRRC34Q8IZ02 419 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 IL31RAQ8NI17 732 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 HELQQ8TDG4 1101 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 KIFAP3Q92845 792 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 JPH2Q9BR39 696 aaPredicted RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 TMEM8AQ9HCN3 771 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 HACL1Q9UJ83 578 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 SCAF8Q9UPN6 1271 aaKnown RBP17.75■□□□□ 0.43
KDM2B-216ENST00000543025 COQ4Q9Y3A0 265 aa17.75■□□□□ 0.43
KDM2B-216ENST00000543025 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
KDM2B-216ENST00000543025 RDXP35241 583 aaKnown RBP17.74■□□□□ 0.43
KDM2B-216ENST00000543025 GPC3P51654 580 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 MTMR1Q13613 665 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 SNCBQ16143 134 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 ZKSCAN4Q969J2 545 aaPredicted RBP17.74■□□□□ 0.43
KDM2B-216ENST00000543025 CCDC127Q96BQ5 260 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 NSRP1Q9H0G5 558 aaKnown RBP17.74■□□□□ 0.43
KDM2B-216ENST00000543025 CCDC113Q9H0I3 377 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 GPRC5CQ9NQ84 441 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 WHRNQ9P202 907 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 CLDN3O15551 220 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 DLATP10515 647 aaKnown RBP17.74■□□□□ 0.43
KDM2B-216ENST00000543025 CAP2P40123 477 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 ZNF568Q3ZCX4 644 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 SGO2Q562F6 1265 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 ACAD10Q6JQN1 1059 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 PARD3BQ8TEW8 1205 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
KDM2B-216ENST00000543025 NT5C1BQ96P26 610 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 CDC42EP4Q9H3Q1 356 aaKnown RBP17.74■□□□□ 0.43
KDM2B-216ENST00000543025 UBIAD1Q9Y5Z9 338 aa17.74■□□□□ 0.43
KDM2B-216ENST00000543025 NFIBO00712 420 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 FSCN2O14926 492 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 ADSSP30520 456 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 KRT17Q04695 432 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 PCNX4Q63HM2 1172 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 NSMFQ6X4W1 530 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 C4orf19Q8IY42 314 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 FBXL13Q8NEE6 735 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 NCAPGQ9BPX3 1015 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 TBC1D22BQ9NU19 505 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 ZNF536O15090 1300 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 POLR2AP24928 1970 aaKnown RBP17.73■□□□□ 0.43
KDM2B-216ENST00000543025 VIMP08670 466 aaKnown RBP17.73■□□□□ 0.43
KDM2B-216ENST00000543025 SPP2Q13103 211 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 CNGA2Q16280 664 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 FAM83AQ86UY5 434 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 DDX1Q92499 740 aaKnown RBP17.73■□□□□ 0.43
KDM2B-216ENST00000543025 SAAL1Q96ER3 474 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 HOMER3Q9NSC5 361 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 RAB20Q9NX57 234 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 TBX20Q9UMR3 447 aa17.73■□□□□ 0.43
KDM2B-216ENST00000543025 TMEM150BA6NC51 233 aa17.72■□□□□ 0.43
KDM2B-216ENST00000543025 GSTA1P08263 222 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms