RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 NOSTRINQ8IVI9 506 aa13.08□□□□□ -0.32
PTPN6-219ENST00000542848 DEPTORQ8TB45 409 aa13.08□□□□□ -0.32
PTPN6-219ENST00000542848 BSNDQ8WZ55 320 aa13.08□□□□□ -0.32
PTPN6-219ENST00000542848 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
PTPN6-219ENST00000542848 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
PTPN6-219ENST00000542848 LLPHQ9BRT6 129 aaKnown RBP13.08□□□□□ -0.32
PTPN6-219ENST00000542848 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
PTPN6-219ENST00000542848 FBXW11Q9UKB1 542 aa13.08□□□□□ -0.32
PTPN6-219ENST00000542848 GVINP1Q7Z2Y8 2422 aa13.08□□□□□ -0.32
PTPN6-219ENST00000542848 RECQL4O94761 1208 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 KIF4AO95239 1232 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 FSHRP23945 695 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 HOXA9P31269 272 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 RBM25P49756 843 aaKnown RBP13.07□□□□□ -0.32
PTPN6-219ENST00000542848 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 HTR4Q13639 388 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 ANGPT1Q15389 498 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 UVSSAQ2YD98 709 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 DCAF4L1Q3SXM0 396 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 HAUS3Q68CZ6 603 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 PHLDB3Q6NSJ2 640 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 GET4Q7L5D6 327 aaPredicted RBP13.07□□□□□ -0.32
PTPN6-219ENST00000542848 CEP57Q86XR8 500 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 HASPINQ8TF76 798 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 KIFAP3Q92845 792 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 IFT74Q96LB3 600 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 LIMCH1Q9UPQ0 1083 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 FRYLO94915 3013 aa13.07□□□□□ -0.32
PTPN6-219ENST00000542848 EP300Q09472 2414 aaPredicted RBP13.07□□□□□ -0.32
PTPN6-219ENST00000542848 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 TMEM189-UBE2V1I3L0A0 370 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 RFX1P22670 979 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 TRAPPC10P48553 1259 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN6-219ENST00000542848 PDIA5Q14554 519 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 PPM1LQ5SGD2 360 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 LIN9Q5TKA1 542 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 DCLRE1AQ6PJP8 1040 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
PTPN6-219ENST00000542848 RTL10Q7L3V2 364 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 APBB1IPQ7Z5R6 666 aaPredicted RBP13.06□□□□□ -0.32
PTPN6-219ENST00000542848 FBXO18Q8NFZ0 1043 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 GPR152Q8TDT2 470 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 CXCL16Q9H2A7 254 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 CA14Q9ULX7 337 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 STK24Q9Y6E0 443 aa13.06□□□□□ -0.32
PTPN6-219ENST00000542848 DCHS1Q96JQ0 3298 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 K7ERI5 159 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 XYLBO75191 536 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 EDN1P05305 212 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 C8AP07357 584 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 POU2F2P09086 479 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 LIG1P18858 919 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 FGFR3P22607 806 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 CCT6AP40227 531 aaKnown RBP13.05□□□□□ -0.32
PTPN6-219ENST00000542848 RAB33AQ14088 237 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 ECM1Q16610 540 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 TTC38Q5R3I4 469 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 NT5DC1Q5TFE4 455 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 ATF7IP2Q5U623 682 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 EEF1DP3Q658K8 133 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 GRASPQ7Z6J2 395 aaPredicted RBP13.05□□□□□ -0.32
PTPN6-219ENST00000542848 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 C4orf32Q8N8J7 132 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 UROC1Q96N76 676 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 PPP1R10Q96QC0 940 aaKnown RBP13.05□□□□□ -0.32
PTPN6-219ENST00000542848 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 SEMA4AQ9H3S1 761 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 TBC1D17Q9HA65 648 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 LRWD1Q9UFC0 647 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 GDAQ9Y2T3 454 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 NUMBLQ9Y6R0 609 aa13.05□□□□□ -0.32
PTPN6-219ENST00000542848 ANK1P16157 1881 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 ADAM12O43184 909 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 TRAPPC3O43617 180 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 HMGN5P82970 282 aaKnown RBP13.04□□□□□ -0.32
PTPN6-219ENST00000542848 AXDND1Q5T1B0 1012 aaPredicted RBP13.04□□□□□ -0.32
PTPN6-219ENST00000542848 MTSS1LQ765P7 747 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 SHDQ96IW2 340 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 SNX27Q96L92 541 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 ZSCAN31Q96LW9 406 aaPredicted RBP13.04□□□□□ -0.32
PTPN6-219ENST00000542848 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 POLD4Q9HCU8 107 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 ARHGEF3Q9NR81 526 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 MTRRQ9UBK8 725 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 NOL7Q9UMY1 257 aaKnown RBP13.04□□□□□ -0.32
PTPN6-219ENST00000542848 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 TNFSF13BQ9Y275 285 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 SIT1Q9Y3P8 196 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
PTPN6-219ENST00000542848 SMIM28A0A1B0GU29 152 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 CCL16O15467 120 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 B3GAT3O94766 335 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 SEC24BO95487 1268 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 OR1D2P34982 312 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 CLCNKBP51801 687 aa13.03□□□□□ -0.32
PTPN6-219ENST00000542848 STARD6P59095 220 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms