RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 HERC2P3Q9BVR0 1158 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 CUEDC2Q9H467 287 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 TOPORSQ9NS56 1045 aaPredicted RBP16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 CHST7Q9NS84 486 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 CACNG4Q9UBN1 327 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 CD207Q9UJ71 328 aa16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 BARX2Q9UMQ3 279 aaPredicted RBP16.91■□□□□ 0.3
ECHDC2-223ENST00000542552 PDCD11Q14690 1871 aaKnown RBP16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 MBTPS2O43462 519 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 FAM189A1O60320 539 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 PPP1R37O75864 691 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 IL9P15248 144 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 KCNE1P15382 129 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 ME1P48163 572 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 YARSP54577 528 aaKnown RBP16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 OSTNP61366 133 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 SMAD2Q15796 467 aaKnown RBP16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 CLUL1Q15846 466 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 ZC2HC1CQ53FD0 456 aaPredicted RBP16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 RESP18Q5W5W9 173 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 SLC39A4Q6P5W5 647 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 SFR1Q86XK3 245 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 SMRP1Q8NCR6 262 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 SNX27Q96L92 541 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 GPR62Q9BZJ7 368 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 TNMDQ9H2S6 317 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 CNTN3Q9P232 1028 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 ANKFY1Q9P2R3 1169 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 ADAM28Q9UKQ2 775 aa16.9■□□□□ 0.3
ECHDC2-223ENST00000542552 A0A0B4J269 797 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 CASTOR2A6NHX0 329 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 HNRNPDLO14979 420 aaKnown RBP16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 LIG4P49917 911 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 GLRA4Q5JXX5 417 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 FUT10Q6P4F1 479 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 CNNM4Q6P4Q7 775 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 GPR65Q8IYL9 337 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 IQUBQ8NA54 791 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 SLC22A17Q8WUG5 538 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 LEO1Q8WVC0 666 aaPredicted RBP16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 BICD1Q96G01 975 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 ZMAT2Q96NC0 199 aaKnown RBP16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 RXFP1Q9HBX9 757 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 OLFML3Q9NRN5 406 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 MRPL17Q9NRX2 175 aaKnown RBP16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 FAM50BQ9Y247 325 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 HCFC2Q9Y5Z7 792 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 TCHHQ07283 1943 aa16.89■□□□□ 0.29
ECHDC2-223ENST00000542552 TMEM189-UBE2V1I3L0A0 370 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 TNFRSF10AO00220 468 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 TADA2AO75478 443 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 KIF4AO95239 1232 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 CLTAP09496 248 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 CNPP09543 421 aaKnown RBP16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 SRGAP2BP0DMP2 458 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 HARSP12081 509 aaKnown RBP16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 DSG1Q02413 1049 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 SOX4Q06945 474 aaPredicted RBP16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 SEZ6Q53EL9 994 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 ANKRD54Q6NXT1 300 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 LLGL2Q6P1M3 1020 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 SYCE2Q6PIF2 218 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 CD300LGQ6UXG3 332 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 STAMQ92783 540 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 DHX58Q96C10 678 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 UROC1Q96N76 676 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 KLHL5Q96PQ7 755 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 LRRC27Q9C0I9 530 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 S1PR5Q9H228 398 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 SSX2IPQ9Y2D8 614 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 STYXL1Q9Y6J8 313 aa16.88■□□□□ 0.29
ECHDC2-223ENST00000542552 TTC26A0AVF1 554 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 ANKRD63C9JTQ0 380 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 OGTO15294 1046 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 URODP06132 367 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 ADRB2P07550 413 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 HOXB8P17481 243 aaPredicted RBP16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 IGFBP6P24592 240 aaPredicted RBP16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 GLUD2P49448 558 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 KRT85P78386 507 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 KYAT1Q16773 422 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 UPP1Q16831 310 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 USP41Q3LFD5 358 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 DCLRE1AQ6PJP8 1040 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 SUSD6Q92537 303 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 CASP10Q92851 521 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 EMILIN2Q9BXX0 1053 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 TRIM9Q9C026 710 aa16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 MRPL44Q9H9J2 332 aaKnown RBP16.87■□□□□ 0.29
ECHDC2-223ENST00000542552 PLEKHA5Q9HAU0 1116 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms