RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 GPBP1Q86WP2 473 aa18■□□□□ 0.47
CCND1-205ENST00000542367 GPR65Q8IYL9 337 aa18■□□□□ 0.47
CCND1-205ENST00000542367 PPP1R10Q96QC0 940 aaKnown RBP18■□□□□ 0.47
CCND1-205ENST00000542367 MAN1C1Q9NR34 630 aa18■□□□□ 0.47
CCND1-205ENST00000542367 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18■□□□□ 0.47
CCND1-205ENST00000542367 LARSQ9P2J5 1176 aaKnown RBP18■□□□□ 0.47
CCND1-205ENST00000542367 TRIP11Q15643 1979 aa18■□□□□ 0.47
CCND1-205ENST00000542367 SMIM28A0A1B0GU29 152 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 C2CD4DB7Z1M9 353 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 ABLIM1O14639 778 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 GLUD1P00367 558 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 MCF2P10911 925 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 MARCKSP29966 332 aaPredicted RBP17.99■□□□□ 0.47
CCND1-205ENST00000542367 MCM6Q14566 821 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 SPECC1Q5M775 1068 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 RTP2Q5QGT7 225 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 FAM171A1Q5VUB5 890 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 PALB2Q86YC2 1186 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 GLYCTKQ8IVS8 523 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 RAD54LQ92698 747 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 ACAP3Q96P50 834 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 REEP2Q9BRK0 252 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 CCSER1Q9C0I3 900 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 TOPORSQ9NS56 1045 aaPredicted RBP17.99■□□□□ 0.47
CCND1-205ENST00000542367 FNIP2Q9P278 1114 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 ODF2LQ9ULJ1 636 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 MTMR6Q9Y217 621 aa17.99■□□□□ 0.47
CCND1-205ENST00000542367 BRD1O95696 1058 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 SPATA31D3P0C874 917 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 HARSP12081 509 aaKnown RBP17.98■□□□□ 0.47
CCND1-205ENST00000542367 RPL17P18621 184 aaKnown RBP17.98■□□□□ 0.47
CCND1-205ENST00000542367 IGFBP6P24592 240 aaPredicted RBP17.98■□□□□ 0.47
CCND1-205ENST00000542367 CLCNKBP51801 687 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 NCKAP1LP55160 1127 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 ZXDAP98168 799 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 CEBPZQ03701 1054 aaKnown RBP17.98■□□□□ 0.47
CCND1-205ENST00000542367 XKR4Q5GH76 650 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 DCLRE1AQ6PJP8 1040 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 PRSS55Q6UWB4 352 aaPredicted RBP17.98■□□□□ 0.47
CCND1-205ENST00000542367 ALKAL1Q6UXT8 129 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 SPATA31D4Q6ZUB0 917 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 USP49Q70CQ1 688 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 CEP57Q86XR8 500 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 EPSTI1Q96J88 318 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 TTPALQ9BTX7 342 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 GOLGA2P5Q9HBQ8 144 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 DPP7Q9UHL4 492 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 HCN4Q9Y3Q4 1203 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 PLXNA3P51805 1871 aa17.98■□□□□ 0.47
CCND1-205ENST00000542367 TRIOO75962 3097 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 CCDC195A0A1B0GUA6 201 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 TGM5O43548 720 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 TOM1L1O75674 476 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 B3GAT3O94766 335 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 KRT18P05783 430 aaKnown RBP17.97■□□□□ 0.47
CCND1-205ENST00000542367 DDIT3P35638 169 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 CREMQ03060 361 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 ELAVL2Q12926 359 aaKnown RBP17.97■□□□□ 0.47
CCND1-205ENST00000542367 ELMSAN1Q6PJG2 1045 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 ZPBP2Q6X784 338 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 C15orf39Q6ZRI6 1047 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 HAUS6Q7Z4H7 955 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 MYCT1Q8N699 235 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 CMASQ8NFW8 434 aaPredicted RBP17.97■□□□□ 0.47
CCND1-205ENST00000542367 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 ANKFY1Q9P2R3 1169 aa17.97■□□□□ 0.47
CCND1-205ENST00000542367 FBXO2Q9UK22 296 aaPredicted RBP17.97■□□□□ 0.47
CCND1-205ENST00000542367 SRPRBQ9Y5M8 271 aaKnown RBP17.97■□□□□ 0.47
CCND1-205ENST00000542367 H0YCG3 227 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 TMEM189-UBE2V1I3L0A0 370 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 CLDN3O15551 220 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 STX6O43752 255 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 RFPL2O75678 378 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 FAM13AO94988 1023 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 C1RP00736 705 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 SOX4Q06945 474 aaPredicted RBP17.96■□□□□ 0.47
CCND1-205ENST00000542367 NOLC1Q14978 699 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCND1-205ENST00000542367 PTPN21Q16825 1174 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 UPP1Q16831 310 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 SEZ6Q53EL9 994 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 LILRA6Q6PI73 481 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 TRIM67Q6ZTA4 783 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 HFE2Q6ZVN8 426 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 LNX1Q8TBB1 728 aaPredicted RBP17.96■□□□□ 0.47
CCND1-205ENST00000542367 HDAC7Q8WUI4 952 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 PIK3R5Q8WYR1 880 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 LARP4BQ92615 738 aaKnown RBP17.96■□□□□ 0.47
CCND1-205ENST00000542367 SNX27Q96L92 541 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 UROC1Q96N76 676 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 ZMAT2Q96NC0 199 aaKnown RBP17.96■□□□□ 0.47
CCND1-205ENST00000542367 ZHX3Q9H4I2 956 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 PLEKHA4Q9H4M7 779 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 PARVGQ9HBI0 331 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 USTQ9Y2C2 406 aa17.96■□□□□ 0.47
CCND1-205ENST00000542367 MYO10Q9HD67 2058 aa17.95■□□□□ 0.46
CCND1-205ENST00000542367 MEFVO15553 781 aaPredicted RBP17.95■□□□□ 0.46
CCND1-205ENST00000542367 KCNE1P15382 129 aa17.95■□□□□ 0.46
CCND1-205ENST00000542367 MATR3P43243 847 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCND1-205ENST00000542367 ZNF131P52739 623 aa17.95■□□□□ 0.46
CCND1-205ENST00000542367 PSMD5Q16401 504 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms