RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 PHF20Q9BVI0 1012 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 SPZ1Q9BXG8 430 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 PSTPIP2Q9H939 334 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 CHST12Q9NRB3 414 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 RXFP3Q9NSD7 469 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 PCDHA6Q9UN73 950 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 CEP131Q9UPN4 1083 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 WASF3Q9UPY6 502 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 SSX2IPQ9Y2D8 614 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 MRPS17Q9Y2R5 130 aaKnown RBP8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 PCDHA8Q9Y5H6 950 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 DMXL2Q8TDJ6 3036 aa8.61□□□□□ -1.03
NPIPB4-215ENST00000542133 LAMA5O15230 3695 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 NRP1O14786 923 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 MAGEB2O15479 319 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 CSDE1O75534 798 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 KIF20AO95235 890 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 C1RP00736 705 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 KIF5BP33176 963 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 RAB27AP51159 221 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 CCR3P51677 355 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 NTHL1P78549 312 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 DSG1Q02413 1049 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 SRSF5Q13243 272 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 SF3A2Q15428 464 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 CEP55Q53EZ4 464 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 RNF187Q5TA31 235 aaPredicted RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 STPG1Q5TH74 334 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 TWF2Q6IBS0 349 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 KLHL10Q6JEL2 608 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 PSAPL1Q6NUJ1 521 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 SWSAP1Q6NVH7 229 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 EFCAB12Q6NXP0 572 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 MIS18BP1Q6P0N0 1132 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 GRASPQ7Z6J2 395 aaPredicted RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 PALB2Q86YC2 1186 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 CKAP2LQ8IYA6 745 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 URGCPQ8TCY9 931 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 ZCCHC14Q8WYQ9 949 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 GATA6Q92908 595 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 CALR3Q96L12 384 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 SUDS3Q9H7L9 328 aaPredicted RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 LY9Q9HBG7 655 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 HEBP1Q9NRV9 189 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 FAM105AQ9NUU6 356 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 SEC63Q9UGP8 760 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 SFMBT1Q9UHJ3 866 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 TCEAL9Q9UHQ7 104 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 ODF2LQ9ULJ1 636 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 NOL7Q9UMY1 257 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 PRG3Q9Y2Y8 225 aaPredicted RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 COL4A3BPQ9Y5P4 624 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 MAFBQ9Y5Q3 323 aaPredicted RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 MYH9P35579 1960 aaKnown RBP8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 F5P12259 2224 aa8.6□□□□□ -1.03
NPIPB4-215ENST00000542133 GOLGA6L3A6NEY3 463 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 CHURC1-FNTBB4DL54 471 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 GAS2O43903 313 aaKnown RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 ZNF623O75123 536 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 SKIP12755 728 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 SPINK2P20155 84 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 TMOD1P28289 359 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 CASQ1P31415 396 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 CNR2P34972 360 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 FNTBP49356 437 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 AFF1P51825 1210 aaKnown RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 PDE1AP54750 535 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 FOXC1Q12948 553 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 PSMD2Q13200 908 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 DHX8Q14562 1220 aaKnown RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 E2F4Q16254 413 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 LILRA6Q6PI73 481 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 AGMOQ6ZNB7 445 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 TRMT1LQ7Z2T5 733 aaKnown RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 C12orf50Q8NA57 414 aaPredicted RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 VPS37AQ8NEZ2 397 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 SVIPQ8NHG7 77 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 ITFG1Q8TB96 612 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 RNF217Q8TC41 542 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 MBOAT7Q96N66 472 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 DSCC1Q9BVC3 393 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 LSM14BQ9BX40 385 aaKnown RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 RETREG1Q9H6L5 497 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 NDRG2Q9UN36 371 aaKnown RBP8.59□□□□□ -1.03
NPIPB4-215ENST00000542133 WDR81Q562E7 1941 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 F8W810 466 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 MEIS1O00470 390 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 IFIT3O14879 490 aaKnown RBP8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 DHX15O43143 795 aaKnown RBP8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 RECKO95980 971 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 S100BP04271 92 aaPredicted RBP8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 ALDH2P05091 517 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 SDSP20132 328 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms