RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SAFBQ15424 915 aaKnown RBP eCLIP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 UGT8Q16880 541 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 CT83Q5H943 113 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 PITRM1Q5JRX3 1037 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 SLC41A1Q8IVJ1 513 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 MDGA1Q8NFP4 955 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 SSH1Q8WYL5 1049 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 ST8SIA2Q92186 375 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 TIFAQ96CG3 184 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 TNIP3Q96KP6 325 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 TEKT5Q96M29 485 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 SORCS2Q96PQ0 1159 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 SARGQ9BW04 601 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 GPR87Q9BY21 358 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 KCTD10Q9H3F6 313 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 PRDM12Q9H4Q4 367 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 FAM204AQ9H8W3 233 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 C1orf112Q9NSG2 853 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 CCM2LQ9NUG4 571 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 CEP72Q9P209 647 aa5.25□□□□□ -1.57
SNHG1-217ENST00000541578 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-217ENST00000541578 WIZO95785 1651 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 XDHP47989 1333 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 TRIM75PA6NK02 468 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 GOLGA6L6A8MZA4 724 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 AP1G1O43747 822 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 DTNBO60941 627 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 STC2O76061 302 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 ZNF202O95125 648 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 LPLP06858 475 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 LTA4HP09960 611 aaKnown RBP5.24□□□□□ -1.57
SNHG1-217ENST00000541578 MTHFD2P13995 350 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 CASRP41180 1078 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 WNT3AP56704 352 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 DUSP2Q05923 314 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 ABHD18Q0P651 414 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 TUBA3CQ13748 450 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 GBX1Q14549 363 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 FSCN1Q16658 493 aaKnown RBP5.24□□□□□ -1.57
SNHG1-217ENST00000541578 RRP12Q5JTH9 1297 aaKnown RBP5.24□□□□□ -1.57
SNHG1-217ENST00000541578 IL31Q6EBC2 164 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 TUBA3EQ6PEY2 450 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 APBB1IPQ7Z5R6 666 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-217ENST00000541578 CATIPQ7Z7H3 387 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 ZFPM1Q8IX07 1006 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 CAMKK1Q8N5S9 505 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 MB21D1Q8N884 522 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 PJA1Q8NG27 643 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 LMBR1Q8WVP7 490 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 ATXN2LQ8WWM7 1075 aaKnown RBP5.24□□□□□ -1.57
SNHG1-217ENST00000541578 EAF2Q96CJ1 260 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-217ENST00000541578 MNTQ99583 582 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 ENKD1Q9H0I2 346 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 CDY2AQ9Y6F7 541 aa5.24□□□□□ -1.57
SNHG1-217ENST00000541578 ZNF608Q9ULD9 1512 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 NARSO43776 548 aaKnown RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 PHKG2P15735 406 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 LPOP22079 712 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 AKAP5P24588 427 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 NEK3P51956 506 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 RABGGTBP53611 331 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 SLC5A3P53794 718 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 MEF2AQ02078 507 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 MRPL49Q13405 166 aaKnown RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 ODF1Q14990 250 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 FAM214AQ32MH5 1076 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 EPM2AIP1Q7L775 607 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 C11orf96Q7Z7L8 435 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 CMIPQ8IY22 773 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 MSL3Q8N5Y2 521 aaKnown RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.23□□□□□ -1.576e-32■□□□□ 8.9
SNHG1-217ENST00000541578 ACRBPQ8NEB7 543 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 IL17RAQ96F46 866 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 RAX2Q96IS3 184 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 PAWRQ96IZ0 340 aaKnown RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 MAP3K14Q99558 947 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 CPPED1Q9BRF8 314 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 QRSL1Q9H0R6 528 aaKnown RBP5.23□□□□□ -1.57
SNHG1-217ENST00000541578 SYNJ1O43426 1573 aa5.23□□□□□ -1.57
SNHG1-217ENST00000541578 EIF4G3O43432 1585 aaKnown RBP5.22□□□□□ -1.57
SNHG1-217ENST00000541578 KLRG2A4D1S0 409 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-217ENST00000541578 FZD9O00144 591 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 NPHP1O15259 732 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 PRAMEF4O60810 478 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 PEX11BO96011 259 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 GYPEP15421 78 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 ENPP1P22413 925 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 MCM7P33993 719 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 GPR3P46089 330 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 GZMKP49863 264 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 SLC16A1P53985 500 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 TOB2Q14106 344 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-217ENST00000541578 GRM3Q14832 879 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 UAP1L1Q3KQV9 507 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 TOR2AQ5JU69 321 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 C10orf62Q5T681 223 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-217ENST00000541578 IGFL4Q6B9Z1 124 aa5.22□□□□□ -1.57
SNHG1-217ENST00000541578 HTR3DQ70Z44 454 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms