RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 CCHCR1Q8TD31 782 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 MYEOVQ96EZ4 313 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 MYOCQ99972 504 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 ADI1Q9BV57 179 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 CYP4F11Q9HBI6 524 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 CLCA2Q9UQC9 943 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 RUVBL1Q9Y265 456 aaKnown RBP5.39□□□□□ -1.55
PRKDC-210ENST00000541488 HS3ST4Q9Y661 456 aa5.39□□□□□ -1.55
PRKDC-210ENST00000541488 MTHFD2P13995 350 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
PRKDC-210ENST00000541488 PROZP22891 400 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 MGAT1P26572 445 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 ALDH1A3P47895 512 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 PPP3CAQ08209 521 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 RESTQ13127 1097 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 TP53BP2Q13625 1128 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 CLUL1Q15846 466 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 BEAN1Q3B7T3 259 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 FAM102AQ5T9C2 384 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-210ENST00000541488 HECTD2Q5U5R9 776 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 TSHZ3Q63HK5 1081 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 ZNF572Q7Z3I7 529 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-210ENST00000541488 SPATS2Q86XZ4 545 aaKnown RBP5.38□□□□□ -1.55
PRKDC-210ENST00000541488 PLXDC1Q8IUK5 500 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 LCORLQ8N3X6 602 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 RAB24Q969Q5 203 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 PAWRQ96IZ0 340 aaKnown RBP5.38□□□□□ -1.55
PRKDC-210ENST00000541488 ZSWIM1Q9BR11 485 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 MRI1Q9BV20 369 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 SERHL2Q9H4I8 314 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 GREM2Q9H772 168 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 RBM12Q9NTZ6 932 aaKnown RBP5.38□□□□□ -1.55
PRKDC-210ENST00000541488 AJAP1Q9UKB5 411 aaPredicted RBP5.38□□□□□ -1.55
PRKDC-210ENST00000541488 PNPLA7Q6ZV29 1317 aa5.38□□□□□ -1.55
PRKDC-210ENST00000541488 GRID2IPA4D2P6 1211 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 B3GALT2O43825 422 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 SPATA31D3P0C874 917 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 ALOX15P16050 662 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-210ENST00000541488 SLC6A2P23975 617 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 ZEB1P37275 1124 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-210ENST00000541488 COL10A1Q03692 680 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 METRNLQ641Q3 311 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 DRICH1Q6PGQ1 229 aaPredicted RBP5.37□□□□□ -1.55
PRKDC-210ENST00000541488 FAM180AQ6UWF9 173 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 SPATA31D4Q6ZUB0 917 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 UBE3BQ7Z3V4 1068 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 KRT26Q7Z3Y9 468 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 OR2I1PQ8NGU4 316 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 DPF2Q92785 391 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 ORAI2Q96SN7 254 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 BCO1Q9HAY6 547 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 SCOCQ9UIL1 159 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 ATP11BQ9Y2G3 1177 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 ACTL7AQ9Y615 435 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 AATKQ6ZMQ8 1374 aa5.37□□□□□ -1.55
PRKDC-210ENST00000541488 TMEM200CA6NKL6 621 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 SNRPA1P09661 255 aaKnown RBP5.36□□□□□ -1.55
PRKDC-210ENST00000541488 ATP5JP18859 108 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 DDX6P26196 483 aaKnown RBP eCLIP5.36□□□□□ -1.55
PRKDC-210ENST00000541488 PLA2G5P39877 138 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 MCAMP43121 646 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 GUCY1B3Q02153 619 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 MALLQ13021 153 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 SEPT2Q15019 361 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 ZNF529Q6P280 563 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 OR56A1Q8NGH5 318 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 ADAM2Q99965 735 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 LANCL2Q9NS86 450 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 SIK3Q9Y2K2 1263 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 WASHC2AQ641Q2 1341 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 ATRNL1Q5VV63 1379 aa5.36□□□□□ -1.55
PRKDC-210ENST00000541488 CCDC78A2IDD5 438 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 DIRC3C9JPN6 131 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 PPFIA4O75335 1185 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 PRSS23O95084 383 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 NUDT3O95989 172 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 ERBB2P04626 1255 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 POU3F3P20264 500 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-210ENST00000541488 PCSK1P29120 753 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 USP14P54578 494 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 ERVK-21P61565 698 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 Q6YL49 198 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 ASB10Q8WXI3 467 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 HOXB13Q92826 284 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-210ENST00000541488 CAVIN3Q969G5 261 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 FBXO34Q9NWN3 711 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 RNF181Q9P0P0 153 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 ZNHIT2Q9UHR6 403 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 PACSIN3Q9UKS6 424 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 FPGT-TNNI3KV9GXZ4 949 aa5.35□□□□□ -1.55
PRKDC-210ENST00000541488 GAGE12BA1L429 117 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 GAGE12HA6NDE8 117 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 PJA2O43164 708 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 SPDEFO95238 335 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 MT-CO1P00395 513 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 ELANEP08246 267 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 VIL1P09327 827 aaKnown RBP5.34□□□□□ -1.55
PRKDC-210ENST00000541488 ITGAMP11215 1152 aa5.34□□□□□ -1.55
PRKDC-210ENST00000541488 IL2RBP14784 551 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms