RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 FBXW11Q9UKB1 542 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 MTCL1Q9Y4B5 1905 aaKnown RBP26.45■■□□□ 1.82
LEMD3-203ENST00000541171 NTHL1P78549 312 aa26.44■■□□□ 1.82
LEMD3-203ENST00000541171 NAB2Q15742 525 aa26.44■■□□□ 1.82
LEMD3-203ENST00000541171 ECM1Q16610 540 aa26.44■■□□□ 1.82
LEMD3-203ENST00000541171 PPM1LQ5SGD2 360 aa26.44■■□□□ 1.82
LEMD3-203ENST00000541171 HAUS3Q68CZ6 603 aa26.44■■□□□ 1.82
LEMD3-203ENST00000541171 NKD2Q969F2 451 aaPredicted RBP26.44■■□□□ 1.82
LEMD3-203ENST00000541171 POLIQ9UNA4 740 aa26.44■■□□□ 1.82
LEMD3-203ENST00000541171 ADAM12O43184 909 aa26.43■■□□□ 1.82
LEMD3-203ENST00000541171 EIF5BO60841 1220 aaKnown RBP26.43■■□□□ 1.82
LEMD3-203ENST00000541171 ELAVL2Q12926 359 aaKnown RBP26.43■■□□□ 1.82
LEMD3-203ENST00000541171 ORC2Q13416 577 aaPredicted RBP26.43■■□□□ 1.82
LEMD3-203ENST00000541171 NBR1Q14596 966 aa26.43■■□□□ 1.82
LEMD3-203ENST00000541171 GLRA4Q5JXX5 417 aa26.43■■□□□ 1.82
LEMD3-203ENST00000541171 BHMT2Q9H2M3 363 aa26.43■■□□□ 1.82
LEMD3-203ENST00000541171 TBC1D17Q9HA65 648 aa26.43■■□□□ 1.82
LEMD3-203ENST00000541171 NUMBLQ9Y6R0 609 aa26.43■■□□□ 1.82
LEMD3-203ENST00000541171 DOCK8Q8NF50 2099 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 CCL16O15467 120 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 C8AP07357 584 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 IGFBP6P24592 240 aaPredicted RBP26.42■■□□□ 1.82
LEMD3-203ENST00000541171 HTR4Q13639 388 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 DCAF4L1Q3SXM0 396 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 NT5DC1Q5TFE4 455 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 ATF7IP2Q5U623 682 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 LRWD1Q9UFC0 647 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 KIAA1024Q9UPX6 916 aa26.42■■□□□ 1.82
LEMD3-203ENST00000541171 ANHXE9PGG2 379 aa26.41■■□□□ 1.82
LEMD3-203ENST00000541171 RBM25P49756 843 aaKnown RBP26.41■■□□□ 1.82
LEMD3-203ENST00000541171 EFNA5P52803 228 aa26.41■■□□□ 1.82
LEMD3-203ENST00000541171 SPECC1Q5M775 1068 aa26.41■■□□□ 1.82
LEMD3-203ENST00000541171 FAM184AQ8NB25 1140 aa26.41■■□□□ 1.82
LEMD3-203ENST00000541171 FBXO18Q8NFZ0 1043 aa26.41■■□□□ 1.82
LEMD3-203ENST00000541171 KIFAP3Q92845 792 aa26.41■■□□□ 1.82
LEMD3-203ENST00000541171 LLPHQ9BRT6 129 aaKnown RBP26.41■■□□□ 1.82
LEMD3-203ENST00000541171 RPP25Q9BUL9 199 aaKnown RBP26.41■■□□□ 1.82
LEMD3-203ENST00000541171 NOL7Q9UMY1 257 aaKnown RBP26.41■■□□□ 1.82
LEMD3-203ENST00000541171 RIF1Q5UIP0 2472 aaKnown RBP26.4■■□□□ 1.82
LEMD3-203ENST00000541171 B3GAT3O94766 335 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 HNRNPA1P09651 372 aaKnown RBP eCLIP26.4■■□□□ 1.82
LEMD3-203ENST00000541171 MUTP22033 750 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 OR1D2P34982 312 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 PDXDC1Q6P996 788 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.4■■□□□ 1.82
LEMD3-203ENST00000541171 C4orf32Q8N8J7 132 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 DDX19AQ9NUU7 478 aaKnown RBP26.4■■□□□ 1.82
LEMD3-203ENST00000541171 CDH7Q9ULB5 785 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 CFAP54Q96N23 3096 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 MYO15AQ9UKN7 3530 aa26.4■■□□□ 1.82
LEMD3-203ENST00000541171 CCDC169A6NNP5 214 aa26.39■■□□□ 1.82
LEMD3-203ENST00000541171 K7ERI5 159 aa26.39■■□□□ 1.82
LEMD3-203ENST00000541171 FXR2P51116 673 aaKnown RBP eCLIP26.39■■□□□ 1.823e-8■■■■■ 30.8
LEMD3-203ENST00000541171 CLCNKBP51801 687 aa26.39■■□□□ 1.82
LEMD3-203ENST00000541171 PARM1Q6UWI2 310 aa26.39■■□□□ 1.82
LEMD3-203ENST00000541171 SLC7A14Q8TBB6 771 aa26.39■■□□□ 1.82
LEMD3-203ENST00000541171 GOLGA2P5Q9HBQ8 144 aa26.39■■□□□ 1.82
LEMD3-203ENST00000541171 ARHGEF3Q9NR81 526 aa26.39■■□□□ 1.82
LEMD3-203ENST00000541171 ZFP37Q9Y6Q3 630 aaPredicted RBP26.39■■□□□ 1.82
LEMD3-203ENST00000541171 DOCK6Q96HP0 2047 aa26.38■■□□□ 1.81
LEMD3-203ENST00000541171 XYLBO75191 536 aa26.38■■□□□ 1.81
LEMD3-203ENST00000541171 DCNP07585 359 aaKnown RBP26.38■■□□□ 1.81
LEMD3-203ENST00000541171 AXDND1Q5T1B0 1012 aaPredicted RBP26.38■■□□□ 1.81
LEMD3-203ENST00000541171 DCLRE1AQ6PJP8 1040 aa26.38■■□□□ 1.81
LEMD3-203ENST00000541171 SNX29Q8TEQ0 813 aa26.38■■□□□ 1.81
LEMD3-203ENST00000541171 FGF14Q92915 247 aa26.38■■□□□ 1.81
LEMD3-203ENST00000541171 PPP1R10Q96QC0 940 aaKnown RBP26.38■■□□□ 1.81
LEMD3-203ENST00000541171 I3L4J1 428 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 FGFR3P22607 806 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 TRAPPC10P48553 1259 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 PEX3P56589 373 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 OSTNP61366 133 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 GPC5P78333 572 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 HMGN5P82970 282 aaKnown RBP26.37■■□□□ 1.81
LEMD3-203ENST00000541171 RAB33AQ14088 237 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 APBB1IPQ7Z5R6 666 aaPredicted RBP26.37■■□□□ 1.81
LEMD3-203ENST00000541171 ADSSL1Q8N142 457 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 CEP120Q8N960 986 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 FGF13Q92913 245 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 SLC2A4RGQ9NR83 387 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 TNFSF13BQ9Y275 285 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 SIT1Q9Y3P8 196 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 CDY1Q9Y6F8 540 aa26.37■■□□□ 1.81
LEMD3-203ENST00000541171 E9PMD0 336 aa26.36■■□□□ 1.81
LEMD3-203ENST00000541171 TKTP29401 623 aaKnown RBP26.36■■□□□ 1.81
LEMD3-203ENST00000541171 BRCC3P46736 316 aa26.36■■□□□ 1.81
LEMD3-203ENST00000541171 PTGDRQ13258 359 aa26.36■■□□□ 1.81
LEMD3-203ENST00000541171 CD300LGQ6UXG3 332 aa26.36■■□□□ 1.81
LEMD3-203ENST00000541171 RSPO2Q6UXX9 243 aaPredicted RBP26.36■■□□□ 1.81
LEMD3-203ENST00000541171 ITFG1Q8TB96 612 aa26.36■■□□□ 1.81
LEMD3-203ENST00000541171 ZSCAN31Q96LW9 406 aaPredicted RBP26.36■■□□□ 1.81
LEMD3-203ENST00000541171 HCFC1R1Q9NWW0 138 aa26.36■■□□□ 1.81
LEMD3-203ENST00000541171 MTRRQ9UBK8 725 aa26.36■■□□□ 1.81
LEMD3-203ENST00000541171 FAM186AA6NE01 2351 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 SMIM28A0A1B0GU29 152 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 TMEM189-UBE2V1I3L0A0 370 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 HOXA9P31269 272 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 YARSP54577 528 aaKnown RBP26.35■■□□□ 1.81
LEMD3-203ENST00000541171 PDIA5Q14554 519 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 UPP1Q16831 310 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms