RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 KCNT1Q5JUK3 1230 aa10.18□□□□□ -0.78
TTC39C-203ENST00000540918 MAP7D3Q8IWC1 876 aa10.18□□□□□ -0.78
TTC39C-203ENST00000540918 BHMTQ93088 406 aa10.18□□□□□ -0.78
TTC39C-203ENST00000540918 KCNMB3Q9NPA1 279 aa10.18□□□□□ -0.78
TTC39C-203ENST00000540918 PLAGL2Q9UPG8 496 aa10.18□□□□□ -0.78
TTC39C-203ENST00000540918 NOC2LQ9Y3T9 749 aaKnown RBP10.18□□□□□ -0.78
TTC39C-203ENST00000540918 MRFAP1Q9Y605 127 aa10.18□□□□□ -0.78
TTC39C-203ENST00000540918 RNF40O75150 1001 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 LAMC2Q13753 1193 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 HHATQ5VTY9 493 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 FKBP1CQ5VVH2 108 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 GPAT2Q6NUI2 795 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 RUFY4Q6ZNE9 571 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 SH3RF1Q7Z6J0 888 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 CCDC13Q8IYE1 715 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 C1orf131Q8NDD1 294 aaKnown RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 SLC5A5Q92911 643 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 DNAJC19Q96DA6 116 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 RNPC3Q96LT9 517 aaKnown RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 ERGIC2Q96RQ1 377 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 SENP7Q9BQF6 1050 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 MRIQ9BWK5 157 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 DHX35Q9H5Z1 703 aaKnown RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 RBM12Q9NTZ6 932 aaKnown RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 HMBSP08397 361 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 BCAR1P56945 870 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 LAMTOR4Q0VGL1 99 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 CXCL17Q6UXB2 119 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 ZNF571Q7Z3V5 609 aaPredicted RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 CEP120Q8N960 986 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 NOVA2Q9UNW9 492 aaKnown RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 GON4LQ3T8J9 2241 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 USP2O75604 605 aaPredicted RBP10.17□□□□□ -0.78
TTC39C-203ENST00000540918 IER5Q5VY09 327 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 METTL7BQ6UX53 244 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 BCAS4Q8TDM0 211 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 RFFLQ8WZ73 363 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 FMO2Q99518 471 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 SAMD15Q9P1V8 674 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 CALCOCO1Q9P1Z2 691 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 NAGPAQ9UK23 515 aa10.17□□□□□ -0.78
TTC39C-203ENST00000540918 CCDC151A5D8V7 595 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 TTI1O43156 1089 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 ARL4AP40617 200 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 SURF1Q15526 300 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 TMEM119Q4V9L6 283 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 CCDC38Q502W7 563 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 ARSHQ5FYA8 562 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 KCNV1Q6PIU1 500 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 CCDC110Q8TBZ0 833 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 RNF139Q8WU17 664 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 L3MBTL3Q96JM7 780 aaPredicted RBP10.16□□□□□ -0.78
TTC39C-203ENST00000540918 ATRNO75882 1429 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 MCF2LO15068 1137 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 KRT3P12035 628 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 COMTP21964 271 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 STX2P32856 288 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 PSMC4P43686 418 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 MOXD1Q6UVY6 613 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 ACOT1Q86TX2 421 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 TRIM59Q8IWR1 403 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 C4orf19Q8IY42 314 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 EMC1Q8N766 993 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 ETNPPLQ8TBG4 499 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 FBF1Q8TES7 1133 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 HPDLQ96IR7 371 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 SNX12Q9UMY4 172 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 ALG6Q9Y672 507 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 B3GAT3O94766 335 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 SRGAP2BP0DMP2 458 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 CDH6P55285 790 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 FKBP1AP62942 108 aaKnown RBP10.16□□□□□ -0.78
TTC39C-203ENST00000540918 PPATQ06203 517 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 TMED2Q15363 201 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.16□□□□□ -0.78
TTC39C-203ENST00000540918 CCDC121Q6ZUS5 278 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 C1orf186Q6ZWK4 172 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 RYBPQ8N488 228 aaPredicted RBP10.16□□□□□ -0.78
TTC39C-203ENST00000540918 OR2W6PQ8NHA6 318 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 SLC35C1Q96A29 364 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 STMN4Q9H169 189 aaPredicted RBP10.16□□□□□ -0.78
TTC39C-203ENST00000540918 MROH8Q9H579 483 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.16□□□□□ -0.78
TTC39C-203ENST00000540918 LRP6O75581 1613 aa10.16□□□□□ -0.78
TTC39C-203ENST00000540918 TOPAZ1Q8N9V7 1692 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 SART1O43290 800 aaKnown RBP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CCNE2O96020 404 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 PDGFRAP16234 1089 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 SDC4P31431 198 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 MICALCLQ6ZW33 695 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 ARHGEF19Q8IW93 802 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 GDAP1Q8TB36 358 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 PBKQ96KB5 322 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CABS1Q96KC9 395 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 TMEM8AQ9HCN3 771 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 BTBD7Q9P203 1132 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms