RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 GPD1LQ8N335 351 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 SNX27Q96L92 541 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 CXCL16Q9H2A7 254 aa16.87■□□□□ 0.29
DDB1-218ENST00000540784 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
DDB1-218ENST00000540784 TTC26A0AVF1 554 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 ZNF233A6NK53 670 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 PTGESO14684 152 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 CXCL8P10145 99 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 KCNE1P15382 129 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 CTNNB1P35222 781 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 CYP2J2P51589 502 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 BCAR1P56945 870 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 PPP2R3AQ06190 1150 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 GRIK3Q13003 919 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 ADSSL1Q8N142 457 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 XXYLT1Q8NBI6 393 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 COLGALT1Q8NBJ5 622 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 FBXO22Q8NEZ5 403 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 DHTKD1Q96HY7 919 aaPredicted RBP16.86■□□□□ 0.29
DDB1-218ENST00000540784 ZNF558Q96NG5 402 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 TSPAN18Q96SJ8 248 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 TMEM175Q9BSA9 504 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 PLVAPQ9BX97 442 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 CNTN3Q9P232 1028 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 HCSTQ9UBK5 93 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 FAN1Q9Y2M0 1017 aa16.86■□□□□ 0.29
DDB1-218ENST00000540784 MEFVO15553 781 aaPredicted RBP16.85■□□□□ 0.29
DDB1-218ENST00000540784 EXOC3O60645 756 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDB1-218ENST00000540784 NR3C1P04150 777 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 ADRB2P07550 413 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 GALTP07902 379 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 LINC00271P0C7V0 271 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 BMP6P22004 513 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 RPL13P26373 211 aaKnown RBP16.85■□□□□ 0.29
DDB1-218ENST00000540784 MYBPC2Q14324 1141 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 GLRA4Q5JXX5 417 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 CENPPQ6IPU0 288 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 SPRED2Q7Z698 418 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 SLC9A9Q8IVB4 645 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 COLGALT2Q8IYK4 626 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 RDH13Q8NBN7 331 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 ZSWIM2Q8NEG5 633 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 TMEM174Q8WUU8 243 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 ASB7Q9H672 318 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 SLC38A7Q9NVC3 462 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 DMAC2Q9NW81 257 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 SPG21Q9NZD8 308 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 DNAJB4Q9UDY4 337 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 PLAGL2Q9UPG8 496 aa16.85■□□□□ 0.29
DDB1-218ENST00000540784 PPP1R3GB7ZBB8 358 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 C5orf67F2Z3F1 127 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 PSMA7O14818 248 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 IL18RAPO95256 599 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 OR1G1P47890 313 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 KRT17Q04695 432 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 SPAG1Q07617 926 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 DSC1Q08554 894 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 TUSC3Q13454 348 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 GPM6BQ13491 265 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 GRIN2CQ14957 1233 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 DEFB123Q8N688 67 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 KLHL23Q8NBE8 558 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 P2RX5Q93086 422 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 KIF12Q96FN5 646 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 FBXL18Q96ME1 805 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 ZMAT2Q96NC0 199 aaKnown RBP16.84■□□□□ 0.29
DDB1-218ENST00000540784 PPP1R10Q96QC0 940 aaKnown RBP16.84■□□□□ 0.29
DDB1-218ENST00000540784 TSG101Q99816 390 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 C11orf84Q9BUA3 381 aaPredicted RBP16.84■□□□□ 0.29
DDB1-218ENST00000540784 COLEC11Q9BWP8 271 aa16.84■□□□□ 0.29
DDB1-218ENST00000540784 RBAKQ9NYW8 714 aaPredicted RBP16.84■□□□□ 0.29
DDB1-218ENST00000540784 LAMA2P24043 3122 aaKnown RBP16.83■□□□□ 0.29
DDB1-218ENST00000540784 NT5C1B-RDH14C9J2C7 533 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 H3BNC9 293 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 NRP1O14786 923 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 XPOTO43592 962 aaKnown RBP16.83■□□□□ 0.28
DDB1-218ENST00000540784 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
DDB1-218ENST00000540784 PBX3P40426 434 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 SLC11A1P49279 550 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 ADAM9Q13443 819 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 SURF1Q15526 300 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 SNRNP35Q16560 246 aaKnown RBP16.83■□□□□ 0.28
DDB1-218ENST00000540784 NFIL3Q16649 462 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 ANKRD40Q6AI12 368 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 CBWD2Q8IUF1 395 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 MLKLQ8NB16 471 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 SYAP1Q96A49 352 aaPredicted RBP16.83■□□□□ 0.28
DDB1-218ENST00000540784 PRDM12Q9H4Q4 367 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 FRMD4BQ9Y2L6 1034 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 DERAQ9Y315 318 aa16.83■□□□□ 0.28
DDB1-218ENST00000540784 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.83■□□□□ 0.28
DDB1-218ENST00000540784 FNDC1Q4ZHG4 1894 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms