RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SSU72P8A0A1W2PR75 194 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 GOLGA6L9A6NEM1 432 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 TSPAN1O60635 241 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 SOX5P35711 763 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 ZACNQ401N2 412 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 TATDN2Q93075 761 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 DUSP10Q9Y6W6 482 aa26.55■■□□□ 1.84
TTC3-225ENST00000540756 ANK1P16157 1881 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 C17orf102A2RUQ5 167 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 EVI5O60447 810 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 GNG11P61952 73 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 ENPEPQ07075 957 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 ZNF410Q86VK4 478 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 KREMEN1Q96MU8 473 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 ADAMTS1Q9UHI8 967 aa26.54■■□□□ 1.84
TTC3-225ENST00000540756 A0A087X0T9 212 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 LCA5LO95447 670 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 VNN1O95497 513 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 FAM228BP0C875 321 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 STAT1P42224 750 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 KRT83P78385 493 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 NBPF20Q3BBV1 942 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 ARHGAP29Q52LW3 1261 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 PPM1KQ8N3J5 372 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 CGRRF1Q99675 332 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 MTG1Q9BT17 334 aaPredicted RBP26.53■■□□□ 1.84
TTC3-225ENST00000540756 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.53■■□□□ 1.841e-6■□□□□ 8
TTC3-225ENST00000540756 MEFVO15553 781 aaPredicted RBP26.53■■□□□ 1.84
TTC3-225ENST00000540756 HOXC8P31273 242 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 KIAA1328Q86T90 577 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 HELQQ8TDG4 1101 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 TMEM40Q8WWA1 233 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 TSKSQ9UJT2 592 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 PCDHA13Q9Y5I0 950 aa26.53■■□□□ 1.84
TTC3-225ENST00000540756 BIRC3Q13489 604 aa26.52■■□□□ 1.84
TTC3-225ENST00000540756 SPA17Q15506 151 aa26.52■■□□□ 1.84
TTC3-225ENST00000540756 DNAAF5Q86Y56 855 aa26.52■■□□□ 1.84
TTC3-225ENST00000540756 TMEM130Q8N3G9 435 aa26.52■■□□□ 1.84
TTC3-225ENST00000540756 RAET1EQ8TD07 263 aa26.52■■□□□ 1.84
TTC3-225ENST00000540756 ZNF296Q8WUU4 475 aaPredicted RBP26.52■■□□□ 1.84
TTC3-225ENST00000540756 PRIMPOLQ96LW4 560 aa26.52■■□□□ 1.84
TTC3-225ENST00000540756 GUCA1BQ9UMX6 200 aa26.52■■□□□ 1.84
TTC3-225ENST00000540756 ERLIN2O94905 339 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 HLA-DRAP01903 254 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 CXCL8P10145 99 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 HOXD10P28358 340 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 PRKCIP41743 596 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 SPOPLQ6IQ16 392 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 SRGAP1Q7Z6B7 1085 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 IFIH1Q9BYX4 1025 aaKnown RBP26.51■■□□□ 1.83
TTC3-225ENST00000540756 SPC25Q9HBM1 224 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 IPO7O95373 1038 aaKnown RBP26.51■■□□□ 1.83
TTC3-225ENST00000540756 HMGCRP04035 888 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 KCNA10Q16322 511 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 MAP3K21Q5TCX8 1036 aa26.51■■□□□ 1.83
TTC3-225ENST00000540756 ASGR1P07306 291 aa26.5■■□□□ 1.83
TTC3-225ENST00000540756 HOXA11P31270 313 aaPredicted RBP26.5■■□□□ 1.83
TTC3-225ENST00000540756 OLIG1Q8TAK6 271 aa26.5■■□□□ 1.83
TTC3-225ENST00000540756 JAKMIP2Q96AA8 810 aa26.5■■□□□ 1.83
TTC3-225ENST00000540756 MTMR12Q9C0I1 747 aa26.5■■□□□ 1.83
TTC3-225ENST00000540756 THSD7BQ9C0I4 1608 aa26.5■■□□□ 1.83
TTC3-225ENST00000540756 FAM170AA1A519 330 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 KIF2AO00139 706 aaPredicted RBP26.49■■□□□ 1.83
TTC3-225ENST00000540756 SLC18A3Q16572 532 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 CCDC122Q5T0U0 273 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 GDF6Q6KF10 455 aaPredicted RBP26.49■■□□□ 1.83
TTC3-225ENST00000540756 EFCAB13Q8IY85 973 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 KIF18AQ8NI77 898 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 DHX38Q92620 1227 aaKnown RBP26.49■■□□□ 1.83
TTC3-225ENST00000540756 NT5C1BQ96P26 610 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 ARID3AQ99856 593 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 GCOM2Q9BZD3 368 aaPredicted RBP26.49■■□□□ 1.83
TTC3-225ENST00000540756 ACP6Q9NPH0 428 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 A0A1B0GUA9 196 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 KPNA6O60684 536 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 STAG3L1P0CL83 205 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 FERP16591 822 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 PIK3CAP42336 1068 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 VAV2P52735 878 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 NKX3-2P78367 333 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 KLHDC9Q8NEP7 349 aa26.49■■□□□ 1.83
TTC3-225ENST00000540756 CST3P01034 146 aaPredicted RBP26.48■■□□□ 1.83
TTC3-225ENST00000540756 DARSP14868 501 aaKnown RBP26.48■■□□□ 1.83
TTC3-225ENST00000540756 RFX1P22670 979 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 ZNF569Q5MCW4 686 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 CCSAPQ6IQ19 270 aaPredicted RBP26.48■■□□□ 1.83
TTC3-225ENST00000540756 WNT8BQ93098 351 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 GTF2IRD1Q9UHL9 959 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 PAXBP1Q9Y5B6 917 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 MCF2P10911 925 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 USP8P40818 1118 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 MAGEA1P43355 309 aa26.48■■□□□ 1.83
TTC3-225ENST00000540756 APOBEC3GQ9HC16 384 aaKnown RBP26.48■■□□□ 1.83
TTC3-225ENST00000540756 BZW2Q9Y6E2 419 aaKnown RBP26.48■■□□□ 1.83
TTC3-225ENST00000540756 GRIN2DO15399 1336 aa26.47■■□□□ 1.83
TTC3-225ENST00000540756 TFAMQ00059 246 aaKnown RBP26.47■■□□□ 1.83
TTC3-225ENST00000540756 FAM47CQ5HY64 1035 aa26.47■■□□□ 1.83
TTC3-225ENST00000540756 CATSPER4Q7RTX7 472 aa26.47■■□□□ 1.83
TTC3-225ENST00000540756 WDR49Q8IV35 697 aa26.47■■□□□ 1.83
TTC3-225ENST00000540756 PACSIN1Q9BY11 444 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms