RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 HEATR6Q6AI08 1181 aaKnown RBP15.1■□□□□ 0.01
COLCA1-204ENST00000540738 TMC7Q7Z402 723 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 MCUQ8NE86 351 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 FAF2Q96CS3 445 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 TMEM8AQ9HCN3 771 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 RSPH14Q9UHP6 348 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 TBX20Q9UMR3 447 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 TCRBV5S4A2TA0A5A2 114 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 PSEN2P49810 448 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 MAP2K5Q13163 448 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 GKAP1Q5VSY0 366 aaPredicted RBP15.1■□□□□ 0.01
COLCA1-204ENST00000540738 MPZL3Q6UWV2 235 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 VSIG1Q86XK7 387 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 HEY1Q9Y5J3 304 aa15.1■□□□□ 0.01
COLCA1-204ENST00000540738 HARS2P49590 506 aaKnown RBP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 PAN2Q504Q3 1202 aaKnown RBP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 CENPUQ71F23 418 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 NUP85Q9BW27 656 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 GOLPH3LQ9H4A5 285 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 MYMKA6NI61 221 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 CLGNO14967 610 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 PPP1R12AO14974 1030 aaPredicted RBP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 ARP10275 920 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 SLMAPQ14BN4 828 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 CEP85LQ5SZL2 805 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 NXNQ6DKJ4 435 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 PCSK1NQ9UHG2 260 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 MSRAQ9UJ68 235 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 A0A1W2PQC6 194 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 THP07101 528 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 FAM200BP0CF97 657 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 SULT1E1P49888 294 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 NFRKBQ6P4R8 1299 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 PCGF5Q86SE9 256 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 RHOT1Q8IXI2 618 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 TMEM199Q8N511 208 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 UCMAQ8WVF2 138 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 POC1B-GALNT4F8VUJ3 575 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 C2CD2LO14523 706 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 ALDH2P05091 517 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 TPI1P60174 286 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 APEX2Q9UBZ4 518 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 CCDC188H7C350 402 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 BUB1BO60566 1050 aaPredicted RBP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 ZC3H11AO75152 810 aaKnown RBP eCLIP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 FTLP02792 175 aaPredicted RBP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 KRT3P12035 628 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 BTG3Q14201 252 aaPredicted RBP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 SEC23AQ15436 765 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 ZNF280DQ6N043 979 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 B4GALNT4Q76KP1 1039 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 SPATA24Q86W54 205 aa15.09■□□□□ 0.01
COLCA1-204ENST00000540738 POLR1AO95602 1720 aaPredicted RBP15.09■□□□□ 0.01
COLCA1-204ENST00000540738 HLA-DRAP01903 254 aa15.08■□□□□ 0.01
COLCA1-204ENST00000540738 FMO5P49326 533 aa15.08■□□□□ 0.01
COLCA1-204ENST00000540738 BBS9Q3SYG4 887 aa15.08■□□□□ 0.01
COLCA1-204ENST00000540738 SCG3Q8WXD2 468 aaKnown RBP15.08■□□□□ 0.01
COLCA1-204ENST00000540738 RAB3IPQ96QF0 476 aaPredicted RBP15.08■□□□□ 0.01
COLCA1-204ENST00000540738 DPP3Q9NY33 737 aa15.08■□□□□ 0.01
COLCA1-204ENST00000540738 MROH7Q68CQ1 1323 aa15.08■□□□□ 0.01
COLCA1-204ENST00000540738 ATP1A3P13637 1013 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 SRRM1Q8IYB3 904 aaKnown RBP15.08■□□□□ 0
COLCA1-204ENST00000540738 RBBP8NLQ8NC74 664 aaPredicted RBP15.08■□□□□ 0
COLCA1-204ENST00000540738 ACRBPQ8NEB7 543 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 UPF1Q92900 1129 aaKnown RBP eCLIP15.08■□□□□ 0
COLCA1-204ENST00000540738 INSRRP14616 1297 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 AXLP30530 894 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 NOP14P78316 857 aaKnown RBP15.08■□□□□ 0
COLCA1-204ENST00000540738 TMEM60Q9H2L4 133 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 SETD4Q9NVD3 440 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 RSPH10B2B2RC85 870 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 TOM1L1O75674 476 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 RSPH10BP0C881 870 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 ZBTB48P10074 688 aaPredicted RBP15.08■□□□□ 0
COLCA1-204ENST00000540738 PTGISQ16647 500 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 ANKRD40Q6AI12 368 aa15.08■□□□□ 0
COLCA1-204ENST00000540738 ZNF286BP0CG31 522 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 MYBP10242 640 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 ZNF131P52739 623 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 EFHC1Q5JVL4 640 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 MCUR1Q96AQ8 359 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 CHMP6Q96FZ7 201 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 PKNOX2Q96KN3 472 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 SENP6Q9GZR1 1112 aaPredicted RBP15.07■□□□□ 0
COLCA1-204ENST00000540738 SLC2A3P11169 496 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 IKBKEQ14164 716 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 ELF2Q15723 593 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 REPS2Q8NFH8 660 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 STK33Q9BYT3 514 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 SOWAHDA6NJG2 315 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 ENC1O14682 589 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 ANO4Q32M45 955 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 AGPAT1Q99943 283 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 COL14A1Q05707 1796 aaKnown RBP15.07■□□□□ 0
COLCA1-204ENST00000540738 NDUFAB1O14561 156 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 PLTPP55058 493 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 LLGL1Q15334 1064 aa15.07■□□□□ 0
COLCA1-204ENST00000540738 NFE2Q16621 373 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms