RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 HTATIP2Q9BUP3 242 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 EPN3Q9H201 632 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 SMARCAD1Q9H4L7 1026 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 KIF9Q9HAQ2 790 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 AGO4Q9HCK5 861 aaKnown RBP8.14□□□□□ -1.11
NECAP1-204ENST00000540083 PDGFCQ9NRA1 345 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 IFNKQ9P0W0 207 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 PCDHA12Q9UN75 941 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 C15orf41Q9Y2V0 281 aa8.14□□□□□ -1.11
NECAP1-204ENST00000540083 KIAA1217Q5T5P2 1943 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 SYNRGQ9UMZ2 1314 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 IGLV3-22A0A075B6J6 115 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 GOLGA6BA6NDN3 693 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 TMEM229AB2RXF0 380 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 FAM86B1E9PN63 330 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 BIN1O00499 593 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 N4BP1O75113 896 aaKnown RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 NPTXRO95502 500 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 PSAPP07602 524 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 FAM86B2P0C5J1 330 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 KCNA2P16389 499 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 UBA1P22314 1058 aaKnown RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 PEX19P40855 299 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 PHKA2P46019 1235 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 GNGT1P63211 74 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 FANCCQ00597 558 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 PTPN11Q06124 597 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 ARHGAP1Q07960 439 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 RESTQ13127 1097 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 PSMD2Q13200 908 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 LRRC41Q15345 812 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 SGSM1Q2NKQ1 1148 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 LRRC23Q53EV4 343 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 ARL6IP4Q66PJ3 421 aaKnown RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 EXOC8Q8IYI6 725 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 KLHDC9Q8NEP7 349 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 B4GALNT2Q8NHY0 566 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 ERMNQ8TAM6 284 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 NEK9Q8TD19 979 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 RHBDD1Q8TEB9 315 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 GLMNQ92990 594 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 CCDC97Q96F63 343 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 CNTNAP3BQ96NU0 1288 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 WDR24Q96S15 920 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 NAPGQ99747 312 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 MTG1Q9BT17 334 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 CNTNAP3Q9BZ76 1288 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 TRIM7Q9C029 511 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 GJB4Q9NTQ9 266 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 TFIP11Q9UBB9 837 aaKnown RBP8.13□□□□□ -1.11
NECAP1-204ENST00000540083 SAMM50Q9Y512 469 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 PCDHA10Q9Y5I2 948 aa8.13□□□□□ -1.11
NECAP1-204ENST00000540083 MCM3APO60318 1980 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 A0A1B0GTH6 734 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 A6NHS1 94 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 MYO1FO00160 1098 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 TLR3O15455 904 aaKnown RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 MSH4O15457 936 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 SLC26A4O43511 780 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ATP9BO43861 1147 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ADAMTS4O75173 837 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 FARP2O94887 1054 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 FAM107AO95990 144 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 PGK1P00558 417 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ASGR1P07306 291 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 MMP3P08254 477 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 OR52Z1P0C646 297 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 SUPT20HL2P0C7V6 817 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ARP10275 920 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 MUTP22033 750 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 MCM7P33993 719 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 MYL5Q02045 173 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 CUL3Q13618 768 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 LBRQ14739 615 aaKnown RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 KCNA10Q16322 511 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 FOXD4L6Q3SYB3 417 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 C4orf17Q53FE4 359 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ACBD5Q5T8D3 534 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 HAUS3Q68CZ6 603 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 EMBQ6PCB8 327 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 FOXD4L3Q6VB84 417 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 CCDC121Q6ZUS5 278 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 BZW1Q7L1Q6 419 aaKnown RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 PLPPR4Q7Z2D5 763 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 CD302Q8IX05 232 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 AFG1LQ8WV93 481 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 MRPS27Q92552 414 aaKnown RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 GLG1Q92896 1179 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 SLC5A5Q92911 643 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ATP6V0A1Q93050 837 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 FERMT2Q96AC1 680 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 SHISA4Q96DD7 197 aa8.12□□□□□ -1.11
NECAP1-204ENST00000540083 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-204ENST00000540083 FAM167AQ96KS9 214 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms