RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TMEM132AQ24JP5 1023 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 ZNF568Q3ZCX4 644 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 ZACNQ401N2 412 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 PHLDB3Q6NSJ2 640 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 GJB7Q6PEY0 223 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 FBXO46Q6PJ61 603 aaPredicted RBP18.24■□□□□ 0.51
COPS3-212ENST00000539941 CD99L2Q8TCZ2 262 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 SCLT1Q96NL6 688 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 POP1Q99575 1024 aaKnown RBP18.24■□□□□ 0.51
COPS3-212ENST00000539941 YY1AP1Q9H869 796 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 LUC7LQ9NQ29 371 aaKnown RBP18.24■□□□□ 0.51
COPS3-212ENST00000539941 TOPORSQ9NS56 1045 aaPredicted RBP18.24■□□□□ 0.51
COPS3-212ENST00000539941 RAB20Q9NX57 234 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 MYO1AQ9UBC5 1043 aa18.24■□□□□ 0.51
COPS3-212ENST00000539941 CPSF3Q9UKF6 684 aaKnown RBP18.24■□□□□ 0.51
COPS3-212ENST00000539941 KIF5CO60282 957 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 GFPT2O94808 682 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 IQCF3P0C7M6 154 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 MCF2P10911 925 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 CYP2C9P11712 490 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 TNNI1P19237 187 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 ARHGAP25P42331 645 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 VAV2P52735 878 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 GNASQ5JWF2 1037 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 ZBTB41Q5SVQ8 909 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 ZBTB33Q86T24 672 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 KIAA1328Q86T90 577 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 TAS1R2Q8TE23 839 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 ZNF668Q96K58 619 aaPredicted RBP18.23■□□□□ 0.51
COPS3-212ENST00000539941 TSGA10Q9BZW7 698 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 ADAMTS10Q9H324 1103 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 PDE11AQ9HCR9 933 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 LZTFL1Q9NQ48 299 aa18.23■□□□□ 0.51
COPS3-212ENST00000539941 C17orf102A2RUQ5 167 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 B4GALT5O43286 388 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 C4BPAP04003 597 aaKnown RBP18.22■□□□□ 0.51
COPS3-212ENST00000539941 HARSP12081 509 aaKnown RBP18.22■□□□□ 0.51
COPS3-212ENST00000539941 ARHGEF6Q15052 776 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 VPS36Q86VN1 386 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 WDR49Q8IV35 697 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 ZNF516Q92618 1163 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 ERO1AQ96HE7 468 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 NT5C1BQ96P26 610 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 GCOM2Q9BZD3 368 aaPredicted RBP18.22■□□□□ 0.51
COPS3-212ENST00000539941 GPR88Q9GZN0 384 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 CDT1Q9H211 546 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 UBE2TQ9NPD8 197 aaPredicted RBP18.22■□□□□ 0.51
COPS3-212ENST00000539941 TRIM17Q9Y577 477 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 HTTP42858 3142 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 SCN10AQ9Y5Y9 1956 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 KRT86O43790 486 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 ERLIN2O94905 339 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 HMGCRP04035 888 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 MFAP3P55082 362 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 CHMP4BP1P59074 171 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 ARID5AQ03989 594 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 SLC18A3Q16572 532 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 EEF1DP3Q658K8 133 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 ENOSF1Q7L5Y1 443 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 NME8Q8N427 588 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 C7orf31Q8N865 590 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 SEMA4DQ92854 862 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
COPS3-212ENST00000539941 FAM49AQ9H0Q0 323 aaPredicted RBP18.22■□□□□ 0.51
COPS3-212ENST00000539941 PCDHA13Q9Y5I0 950 aa18.22■□□□□ 0.51
COPS3-212ENST00000539941 MYADML2A6NDP7 307 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 ZNF263O14978 683 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 EVI5O60447 810 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 GPR32O75388 356 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 PRKAR2AP13861 404 aaKnown RBP18.21■□□□□ 0.51
COPS3-212ENST00000539941 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
COPS3-212ENST00000539941 GNG11P61952 73 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 PTK2Q05397 1052 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 C10orf76Q5T2E6 689 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 APBB1IPQ7Z5R6 666 aaPredicted RBP18.21■□□□□ 0.51
COPS3-212ENST00000539941 ARHGEF19Q8IW93 802 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 JAKMIP2Q96AA8 810 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 PDZD7Q9H5P4 517 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 HDAC6Q9UBN7 1215 aa18.21■□□□□ 0.51
COPS3-212ENST00000539941 ATP8B3O60423 1300 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 VGLL3A8MV65 326 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 TSPAN1O60635 241 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 ADAMTS4O75173 837 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 IL18RAPO95256 599 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 CLTAP09496 248 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 ARF4P18085 180 aaPredicted RBP18.2■□□□□ 0.5
COPS3-212ENST00000539941 TNFSF9P41273 254 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 WNT7BP56706 349 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 CYP27A1Q02318 531 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 GCNT1Q02742 428 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 KIF5AQ12840 1032 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 TRIM32Q13049 653 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 MAP3K21Q5TCX8 1036 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 TDRD10Q5VZ19 366 aaKnown RBP18.2■□□□□ 0.5
COPS3-212ENST00000539941 TAF2Q6P1X5 1199 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 PPP1R16BQ96T49 567 aa18.2■□□□□ 0.5
COPS3-212ENST00000539941 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms