RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NOTUMQ6P988 496 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 C4orf19Q8IY42 314 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 SUMF1Q8NBK3 374 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 PIGOQ8TEQ8 1089 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 RSPH1Q8WYR4 309 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.24
USB1-203ENST00000539737 COLEC11Q9BWP8 271 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 TRIM6Q9C030 488 aaPredicted RBP16.52■□□□□ 0.24
USB1-203ENST00000539737 POLD4Q9HCU8 107 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 ADAM28Q9UKQ2 775 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 NRG2O14511 850 aaPredicted RBP16.51■□□□□ 0.23
USB1-203ENST00000539737 SLITRK3O94933 977 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
USB1-203ENST00000539737 MCM7P33993 719 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 USP41Q3LFD5 358 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 TCP11Q8WWU5 503 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 FGF13Q92913 245 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 CLSTN3Q9BQT9 956 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 PLA2G2FQ9BZM2 168 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 POLR3FQ9H1D9 316 aaPredicted RBP16.51■□□□□ 0.23
USB1-203ENST00000539737 SPATA6Q9NWH7 488 aaPredicted RBP16.51■□□□□ 0.23
USB1-203ENST00000539737 FBXW11Q9UKB1 542 aa16.51■□□□□ 0.23
USB1-203ENST00000539737 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
USB1-203ENST00000539737 CARNS1A5YM72 827 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 I3L4J1 428 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 PTGESO14684 152 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
USB1-203ENST00000539737 TADA2AO75478 443 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 C8AP07357 584 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 LIG1P18858 919 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 ARL2P36404 184 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
USB1-203ENST00000539737 RILPL1Q5EBL4 403 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 FAM171A1Q5VUB5 890 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 PHLDB3Q6NSJ2 640 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 RSPO2Q6UXX9 243 aaPredicted RBP16.5■□□□□ 0.23
USB1-203ENST00000539737 CNTNAP3BQ96NU0 1288 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 EIF2AK1Q9BQI3 630 aaKnown RBP16.5■□□□□ 0.23
USB1-203ENST00000539737 CNTNAP3Q9BZ76 1288 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 ZSWIM4Q9H7M6 989 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 SLC2A4RGQ9NR83 387 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 ZDHHC7Q9NXF8 308 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 SSX2IPQ9Y2D8 614 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 ACACBO00763 2458 aa16.5■□□□□ 0.23
USB1-203ENST00000539737 OR52Z1P0C646 297 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
USB1-203ENST00000539737 PSMD5Q16401 504 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 GLRA4Q5JXX5 417 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 BRAPQ7Z569 592 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 CNNM3Q8NE01 707 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 LNX1Q8TBB1 728 aaPredicted RBP16.49■□□□□ 0.23
USB1-203ENST00000539737 SLC7A14Q8TBB6 771 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 BSNDQ8WZ55 320 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 RUBCNQ92622 972 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 MTMR9Q96QG7 549 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 PLEKHA4Q9H4M7 779 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 UBN1Q9NPG3 1134 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 CDH7Q9ULB5 785 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 PCDHA12Q9UN75 941 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 GIT1Q9Y2X7 761 aa16.49■□□□□ 0.23
USB1-203ENST00000539737 ZFHX4Q86UP3 3567 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 LRRIQ4A6NIV6 560 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 ASAP2O43150 1006 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 PAPLNO95428 1278 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 TARSP26639 723 aaKnown RBP16.48■□□□□ 0.23
USB1-203ENST00000539737 STARD6P59095 220 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 NCBP1Q09161 790 aaKnown RBP16.48■□□□□ 0.23
USB1-203ENST00000539737 GRIK3Q13003 919 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 ZNF174Q15697 407 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 MLF2Q15773 248 aaPredicted RBP16.48■□□□□ 0.23
USB1-203ENST00000539737 LPAL2Q16609 132 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 SLC5A9Q2M3M2 681 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 SLC44A4Q53GD3 710 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 EEF1DP3Q658K8 133 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 TMEM130Q8N3G9 435 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 RHOBTB2Q9BYZ6 727 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
USB1-203ENST00000539737 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.23
USB1-203ENST00000539737 FNIP2Q9P278 1114 aa16.48■□□□□ 0.23
USB1-203ENST00000539737 DNMT3BQ9UBC3 853 aaKnown RBP16.48■□□□□ 0.23
USB1-203ENST00000539737 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 SHISA7A6NL88 538 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 FAM170BA6NMN3 283 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 LAD1O00515 517 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 NR1I2O75469 434 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 RECQL4O94761 1208 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 SYT1P21579 422 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 TXKP42681 527 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 RARRES1P49788 294 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 NAB2Q15742 525 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 IFNLR1Q8IU57 520 aaPredicted RBP16.47■□□□□ 0.23
USB1-203ENST00000539737 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 CCDC51Q96ER9 411 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 MCRS1Q96EZ8 462 aa16.47■□□□□ 0.23
USB1-203ENST00000539737 KIFC3Q9BVG8 833 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms