RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.95□□□□□ -0.66
SPARC-209ENST00000539687 UVRAGQ9P2Y5 699 aa10.95□□□□□ -0.66
SPARC-209ENST00000539687 LCMT1Q9UIC8 334 aa10.95□□□□□ -0.66
SPARC-209ENST00000539687 MANSC4A6NHS7 340 aaPredicted RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 CCDC188H7C350 402 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 OGTO15294 1046 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 ZEB2O60315 1214 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 SRGAP2O75044 1071 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 PHACTR2O75167 634 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 PPFIA4O75335 1185 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 MTA2O94776 668 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 IL18RAPO95256 599 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 C4BPAP04003 597 aaKnown RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 CYP11B1P15538 503 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 ZSCAN20P17040 1043 aaPredicted RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 USP8P40818 1118 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 SOX10P56693 466 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 MCL1Q07820 350 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 ARHGAP1Q07960 439 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 PRPF4BQ13523 1007 aaKnown RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 FAM187BQ17R55 369 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 IQSEC1Q6DN90 963 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 C11orf63Q6NUN7 778 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 NFRKBQ6P4R8 1299 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 MPZL3Q6UWV2 235 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 TSHZ1Q6ZSZ6 1077 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 DAAM2Q86T65 1068 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 RPUSD2Q8IZ73 545 aaKnown RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 LRRC57Q8N9N7 239 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 RNF149Q8NC42 400 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 ACTRT1Q8TDG2 376 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 TAS1R2Q8TE23 839 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 BRI3BPQ8WY22 251 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 PKNOX2Q96KN3 472 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 TARS2Q9BW92 718 aaKnown RBP10.94□□□□□ -0.66
SPARC-209ENST00000539687 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 SUGCTQ9HAC7 445 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 ANKFY1Q9P2R3 1169 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 SALL4Q9UJQ4 1053 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 PCDHB2Q9Y5E7 798 aa10.94□□□□□ -0.66
SPARC-209ENST00000539687 TMCO5BA8MYB1 307 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 MSCO60682 206 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 CELF2O95319 508 aaKnown RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 LGALS2P05162 132 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 RHOXF2BP0C7M4 288 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 MARK3P27448 753 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 TNFRSF8P28908 595 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 NLRP11P59045 1033 aaKnown RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 PTENP60484 403 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 PCBP1Q15365 356 aaKnown RBP eCLIP10.93□□□□□ -0.66
SPARC-209ENST00000539687 TMEM132AQ24JP5 1023 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 DUSP28Q4G0W2 176 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 TAPT1Q6NXT6 567 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 C8orf74Q6P047 294 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 GPR142Q7Z601 462 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 UBL4BQ8N7F7 174 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 EIF1ADQ8N9N8 165 aaKnown RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 SLC35G2Q8TBE7 412 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 SEMA4DQ92854 862 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 RPS6KC1Q96S38 1066 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 ACO2Q99798 780 aaKnown RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 RHOXF2Q9BQY4 288 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 PLVAPQ9BX97 442 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 FZD8Q9H461 694 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 FAM124BQ9H5Z6 455 aaPredicted RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 VIPAS39Q9H9C1 493 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 NOCTQ9UK39 431 aaKnown RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 TTC7AQ9ULT0 858 aaPredicted RBP10.93□□□□□ -0.66
SPARC-209ENST00000539687 TNFSF13BQ9Y275 285 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 TELO2Q9Y4R8 837 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 DOCK5Q9H7D0 1870 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 PLXNB2O15031 1838 aa10.93□□□□□ -0.66
SPARC-209ENST00000539687 GOLGA6L10A0A0M3HER8 536 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 RRN3P2A6NIE6 340 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 PGRMC1O00264 195 aaKnown RBP10.92□□□□□ -0.66
SPARC-209ENST00000539687 PEX10O60683 326 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 C22orf31O95567 290 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 FTCDO95954 541 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 HLA-DRAP01903 254 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 TNNC2P02585 160 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 FTLP02792 175 aaPredicted RBP10.92□□□□□ -0.66
SPARC-209ENST00000539687 PNMA6AP0CW24 399 aaPredicted RBP10.92□□□□□ -0.66
SPARC-209ENST00000539687 HOXD8P13378 290 aaPredicted RBP10.92□□□□□ -0.66
SPARC-209ENST00000539687 KRT5P13647 590 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 INHBEP58166 350 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 DUOXA2Q1HG44 320 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 LONRF2Q1L5Z9 754 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 ATF7IP2Q5U623 682 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 EFCAB12Q6NXP0 572 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 RHPN2Q8IUC4 686 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 GPIHBP1Q8IV16 184 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 IFT20Q8IY31 132 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 NOA1Q8NC60 698 aaKnown RBP10.92□□□□□ -0.66
SPARC-209ENST00000539687 COG1Q8WTW3 980 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms