RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 STRN3Q13033 797 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 AOC3Q16853 763 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 SHROOM1Q2M3G4 852 aaPredicted RBP14.16□□□□□ -0.14
UBE3B-209ENST00000539584 DACT2Q5SW24 774 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 VSTM1Q6UX27 236 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 CCDC25Q86WR0 208 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 KIAA0825Q8IV33 1275 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 ANKRD35Q8N283 1001 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 SAMD3Q8N6K7 520 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 TCP11Q8WWU5 503 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 KREMEN1Q96MU8 473 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 PCIF1Q9H4Z3 704 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 UBN1Q9NPG3 1134 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 ARHGEF3Q9NR81 526 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 NKIRAS1Q9NYS0 192 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
UBE3B-209ENST00000539584 KLHL14Q9P2G3 628 aa14.16□□□□□ -0.14
UBE3B-209ENST00000539584 TCRBV7S2A1N4TA0A589 114 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ANKRD63C9JTQ0 380 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 TP73O15350 636 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 UBOX5O94941 541 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 CLTAP09496 248 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 SLURP2P0DP57 97 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ATF2P15336 505 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 IVDP26440 423 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 MAPK4P31152 587 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ABCD1P33897 745 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 QARSP47897 775 aaKnown RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 KCNJ1P48048 391 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 BPIFB4P59827 614 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 NCALDP61601 193 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 GCNT1Q02742 428 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 LONRF1Q17RB8 773 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 NUGGCQ68CJ6 796 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ZNF746Q6NUN9 644 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 TBC1D1Q86TI0 1168 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 PNMA8AQ86V59 439 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 SLC47A2Q86VL8 602 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 BANK1Q8NDB2 785 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 FBXL13Q8NEE6 735 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 HELQQ8TDG4 1101 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 PPCSQ9HAB8 311 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ABCF3Q9NUQ8 709 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 MAP3K20Q9NYL2 800 aaKnown RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 CLDN3O15551 220 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 THAP12O43422 761 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 BRAFP15056 766 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 GBP2P32456 591 aaPredicted RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 STX2P32856 288 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 CACNB3P54284 484 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 PPARDQ03181 441 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 CCNG2Q16589 344 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 CLEC16AQ2KHT3 1053 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 FAM133BQ5BKY9 247 aaKnown RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 DDX1Q92499 740 aaKnown RBP14.15□□□□□ -0.14
UBE3B-209ENST00000539584 MIEF2Q96C03 454 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 KLHL29Q96CT2 875 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 MASTLQ96GX5 879 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ECT2Q9H8V3 914 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 C17orf75Q9HAS0 396 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 TBC1D22BQ9NU19 505 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 FGFR1OP2Q9NVK5 253 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ANAPC5Q9UJX4 755 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 USP21Q9UK80 565 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ZHX2Q9Y6X8 837 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 ADAMTSL1Q8N6G6 1762 aa14.15□□□□□ -0.14
UBE3B-209ENST00000539584 TOM1O60784 492 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 WFS1O76024 890 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 ACSL3O95573 720 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 CCNB1P14635 433 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 HSD17B4P51659 736 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 IL9RQ01113 521 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 GHRHRQ02643 423 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 SNRNP35Q16560 246 aaKnown RBP14.14□□□□□ -0.15
UBE3B-209ENST00000539584 C4orf19Q8IY42 314 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 NLGN1Q8N2Q7 840 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 PARD3BQ8TEW8 1205 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 RAB3IPQ96QF0 476 aaPredicted RBP14.14□□□□□ -0.15
UBE3B-209ENST00000539584 DCLK3Q9C098 648 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 RAB20Q9NX57 234 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 SENP1Q9P0U3 644 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 FEM1BQ9UK73 627 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 LTBP4Q8N2S1 1624 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 MYH11P35749 1972 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 PSTPIP1O43586 416 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 DLATP10515 647 aaKnown RBP14.14□□□□□ -0.15
UBE3B-209ENST00000539584 E2F5Q15329 346 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 MTFR1Q15390 333 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 SPDYAQ5MJ70 313 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 ASRGL1Q7L266 308 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 UHMK1Q8TAS1 419 aaKnown RBP14.14□□□□□ -0.15
UBE3B-209ENST00000539584 PLEKHO2Q8TD55 490 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 FBF1Q8TES7 1133 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 MFSD14AQ96MC6 490 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 FBXL18Q96ME1 805 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 CSRNP1Q96S65 589 aa14.14□□□□□ -0.15
UBE3B-209ENST00000539584 DDX23Q9BUQ8 820 aaKnown RBP14.14□□□□□ -0.15
UBE3B-209ENST00000539584 MTFR1LQ9H019 292 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms