RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 NDFIP2Q9NV92 336 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SRGNP10124 158 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ARFIP2P53365 341 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 KRT17Q04695 432 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF235Q14590 738 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SCFD1Q8WVM8 642 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CYTH2Q99418 400 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 UBA6A0AVT1 1052 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 DNAJC6O75061 913 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 CPB1P15086 417 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 PTK2BQ14289 1009 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 NFIXQ14938 502 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 C1orf146Q5VVC0 180 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ICA1LQ8NDH6 482 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TSPAN17Q96FV3 270 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SENP7Q9BQF6 1050 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SARS2Q9NP81 518 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 CHCHD3Q9NX63 227 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 STX18Q9P2W9 335 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 FAM196BA6NMK8 535 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SNAP23O00161 211 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 KCNN4O15554 427 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 PHF2O75151 1096 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TADA2AO75478 443 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TYK2P29597 1187 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TMEM132DQ14C87 1099 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 HABP4Q5JVS0 413 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 XRRA1Q6P2D8 792 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 HHIPL2Q6UWX4 724 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SZRD1Q7Z422 152 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF677Q86XU0 584 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SLC38A7Q9NVC3 462 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 NSMCE4AQ9NXX6 385 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 DFFAO00273 331 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 HAUS5O94927 633 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SLC25A27O95847 323 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 OCA2Q04671 838 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF211Q13398 564 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SV2CQ496J9 727 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ACCSLQ4AC99 568 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 RNF149Q8NC42 400 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SPATA4Q8NEY3 305 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TBC1D16Q8TBP0 767 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 KRT35Q92764 455 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 DCUN1D1Q96GG9 259 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ATP6V1G3Q96LB4 118 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 EGFL8Q99944 293 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TEX13BQ9BXU2 312 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 HSPBP1Q9NZL4 362 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ADAM21Q9UKJ8 722 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 PI4K2BG5E9Z4 385 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 RHOBTB3O94955 611 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 GH1P01241 217 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TXNP10599 105 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ADORA2BP29275 332 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SULT1E1P49888 294 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ARID5BQ14865 1188 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 NCAPHQ15003 741 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 PID1Q7Z2X4 250 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ATG9AQ7Z3C6 839 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ELOA2Q8IYF1 753 aaPredicted RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ARHGEF26Q96DR7 871 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ADA2Q9NZK5 511 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SNX12Q9UMY4 172 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ARHGAP26Q9UNA1 814 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 A0A1W2PQJ5 194 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 STK25O00506 426 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TBC1D19Q8N5T2 526 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 APPL2Q8NEU8 664 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 PBXIP1Q96AQ6 731 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 RNPC3Q96LT9 517 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 TRIM9Q9C026 710 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 SMG5Q9UPR3 1016 aaKnown RBP6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF609O15014 1411 aa6.84□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF197O14709 1029 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 SERPINB9P50453 376 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 KCNA1Q09470 495 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 PDCLQ13371 301 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 SNX17Q15036 470 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF746Q6NUN9 644 aaPredicted RBP6.84□□□□□ -1.32
LSAMP-207ENST00000539563 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 FAM129AQ9BZQ8 928 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 ECT2Q9H8V3 914 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 FMO5P49326 533 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 DPYDQ12882 1025 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 SNAPC2Q13487 334 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 MED21Q13503 144 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 P3H1Q32P28 736 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 STYK1Q6J9G0 422 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 RASGRP2Q7LDG7 609 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 SLC26A7Q8TE54 656 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 BTBD6Q96KE9 485 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 NYAP2Q9P242 653 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 PCDHGB4Q9UN71 923 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 JCADQ9P266 1359 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 CD163L1Q9NR16 1453 aa6.84□□□□□ -1.32
LSAMP-207ENST00000539563 FRMD3A2A2Y4 597 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 TEX33O43247 280 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 HADHAP40939 763 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms