RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ECE1P42892 770 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 COPS2P61201 443 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 GALNTL6Q49A17 601 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 FAM47EQ6ZV65 393 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 SPATA21Q7Z572 469 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 SEMA4DQ92854 862 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 CCDC127Q96BQ5 260 aa21.71■■□□□ 1.07
TMEM260-203ENST00000539559 L3MBTL3Q96JM7 780 aaPredicted RBP21.71■■□□□ 1.07
TMEM260-203ENST00000539559 SCN9AQ15858 1988 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 ITGA8P53708 1063 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 ABCB5Q2M3G0 1257 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 SRRM1Q8IYB3 904 aaKnown RBP21.7■■□□□ 1.06
TMEM260-203ENST00000539559 KCNV2Q8TDN2 545 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 TGS1Q96RS0 853 aaKnown RBP21.7■■□□□ 1.06
TMEM260-203ENST00000539559 PAIP2Q9BPZ3 127 aaKnown RBP21.7■■□□□ 1.06
TMEM260-203ENST00000539559 ZNF577Q9BSK1 485 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 IDI2Q9BXS1 227 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 NEBLO76041 1014 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 MMP14P50281 582 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 RWDD2BP57060 319 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 ZNF568Q3ZCX4 644 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 STXBP4Q6ZWJ1 553 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 CYFIP1Q7L576 1253 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 RSRC1Q96IZ7 334 aaKnown RBP21.7■■□□□ 1.06
TMEM260-203ENST00000539559 ZNF570Q96NI8 536 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 NACC1Q96RE7 527 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 HEMGNQ9BXL5 484 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 TMEM117Q9H0C3 514 aa21.7■■□□□ 1.06
TMEM260-203ENST00000539559 R3HDM2Q9Y2K5 976 aaKnown RBP21.7■■□□□ 1.06
TMEM260-203ENST00000539559 C10orf71Q711Q0 1435 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 BNIP1Q12981 228 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 RASA3Q14644 834 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 CLUL1Q15846 466 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 RUNDC3BQ96NL0 473 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 STK24Q9Y6E0 443 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 A0A1B0GUA9 196 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 KIF1CO43896 1103 aaKnown RBP21.69■■□□□ 1.06
TMEM260-203ENST00000539559 PPP2R5CQ13362 524 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 ANKLE1Q8NAG6 615 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 C9orf72Q96LT7 481 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 ADAM33Q9BZ11 813 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 PI4KBQ9UBF8 816 aa21.69■■□□□ 1.06
TMEM260-203ENST00000539559 O00370 1275 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 THAP12O43422 761 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 GGPS1O95749 300 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 GBP1P32455 592 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 RIPK1Q13546 671 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 RBM26Q5T8P6 1007 aaKnown RBP21.68■■□□□ 1.06
TMEM260-203ENST00000539559 PADI6Q6TGC4 694 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 TRMT10CQ7L0Y3 403 aaKnown RBP21.68■■□□□ 1.06
TMEM260-203ENST00000539559 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 PSPC1Q8WXF1 523 aaKnown RBP21.68■■□□□ 1.06
TMEM260-203ENST00000539559 SLC5A5Q92911 643 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 FAXDC2Q96IV6 333 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 TOPORSQ9NS56 1045 aaPredicted RBP21.68■■□□□ 1.06
TMEM260-203ENST00000539559 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.68■■□□□ 1.06
TMEM260-203ENST00000539559 SEL1LQ9UBV2 794 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
TMEM260-203ENST00000539559 ADRB2P07550 413 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 STX2P32856 288 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 MXI1P50539 228 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 SLC16A10Q8TF71 515 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 CKAP2Q8WWK9 683 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 SAAL1Q96ER3 474 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 ARHGEF10LQ9HCE6 1279 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 GPRC5CQ9NQ84 441 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 HSPBP1Q9NZL4 362 aa21.68■■□□□ 1.06
TMEM260-203ENST00000539559 CETN1Q12798 172 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 CRYMQ14894 314 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 HP1BP3Q5SSJ5 553 aaPredicted RBP21.67■■□□□ 1.06
TMEM260-203ENST00000539559 CRELD2Q6UXH1 353 aaPredicted RBP21.67■■□□□ 1.06
TMEM260-203ENST00000539559 INTS8Q75QN2 995 aaKnown RBP21.67■■□□□ 1.06
TMEM260-203ENST00000539559 SPOCK2Q92563 424 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 ROPN1BQ9BZX4 212 aaPredicted RBP21.67■■□□□ 1.06
TMEM260-203ENST00000539559 ROPN1Q9HAT0 212 aaPredicted RBP21.67■■□□□ 1.06
TMEM260-203ENST00000539559 TTC4O95801 387 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 ZYXQ15942 572 aaKnown RBP21.67■■□□□ 1.06
TMEM260-203ENST00000539559 RHBDF2Q6PJF5 856 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 TMEM179Q6ZVK1 233 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 CROCCP2Q86T23 111 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 CBWD2Q8IUF1 395 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 FAM71AQ8IYT1 594 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 SLC17A8Q8NDX2 589 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 SERPINB12Q96P63 405 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 STRA6Q9BX79 667 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 LRRC19Q9H756 370 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 ARL2BPQ9Y2Y0 163 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 SIPA1L1O43166 1804 aa21.67■■□□□ 1.06
TMEM260-203ENST00000539559 YDJCA8MPS7 323 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 IVDP26440 423 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 FOXN2P32314 431 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 ADCY8P40145 1251 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 MSH2P43246 934 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 RNASELQ05823 741 aaKnown RBP21.66■■□□□ 1.06
TMEM260-203ENST00000539559 NINJ2Q9NZG7 142 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 ANAPC7Q9UJX3 599 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 SPAG7O75391 227 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 CYP11B1P15538 503 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 CEP55Q53EZ4 464 aa21.66■■□□□ 1.06
TMEM260-203ENST00000539559 SLC9A9Q8IVB4 645 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms