RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 HPDP32754 393 aaPredicted RBP7.44□□□□□ -1.22
PROM1-219ENST00000539194 CHKAP35790 457 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 IFT88Q13099 833 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 ARHGAP44Q17R89 818 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 SCARA3Q6AZY7 606 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 TRMT10CQ7L0Y3 403 aaKnown RBP7.44□□□□□ -1.22
PROM1-219ENST00000539194 ZNF564Q8TBZ8 553 aaPredicted RBP7.44□□□□□ -1.22
PROM1-219ENST00000539194 CABS1Q96KC9 395 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 NUP85Q9BW27 656 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 TRIM7Q9C029 511 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 KIAA1683Q9H0B3 1180 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 VPS33BQ9H267 617 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 PCIF1Q9H4Z3 704 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 C17orf75Q9HAS0 396 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 LARSQ9P2J5 1176 aaKnown RBP7.44□□□□□ -1.22
PROM1-219ENST00000539194 CAPN7Q9Y6W3 813 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 O00370 1275 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 GJB6O95452 261 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 EDN1P05305 212 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 ADCY2Q08462 1091 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 MGAT5Q09328 741 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 C6orf118Q5T5N4 469 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 ZNF746Q6NUN9 644 aaPredicted RBP7.44□□□□□ -1.22
PROM1-219ENST00000539194 MCOLN2Q8IZK6 566 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 SLC17A8Q8NDX2 589 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 RDM1Q8NG50 284 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 TAS1R2Q8TE23 839 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 TMEM39BQ9GZU3 492 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 PXMP2Q9NR77 195 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 TBC1D22BQ9NU19 505 aa7.44□□□□□ -1.22
PROM1-219ENST00000539194 ARHGEF35A5YM69 484 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 C21orf2O43822 256 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 SORBS3O60504 671 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ATG7O95352 703 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 CREB1P16220 341 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ZNF252P-AS1Q0IIN9 211 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PPP1R15BQ5SWA1 713 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 KRT39Q6A163 491 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 MICALCLQ6ZW33 695 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 SV2AQ7L0J3 742 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ZNF276Q8N554 614 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ANKS4BQ8N8V4 417 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 CDC42EP4Q9H3Q1 356 aaKnown RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 CHST7Q9NS84 486 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 KLC4Q9NSK0 619 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 AGAP1Q9UPQ3 857 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PDCD11Q14690 1871 aaKnown RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 CCT8L1PA6NM43 557 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 MAGEB2O15479 319 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 SNX3O60493 162 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 CFHP08603 1231 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ATP4AP20648 1035 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PTPN7P35236 360 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ZNF76P36508 570 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 MXI1P50539 228 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PLTPP55058 493 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 RIPK1Q13546 671 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 SLMAPQ14BN4 828 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PREPLQ4J6C6 727 aaPredicted RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 DRICH1Q6PGQ1 229 aaPredicted RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 SYDE1Q6ZW31 735 aaPredicted RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 OTUD6BQ8N6M0 293 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 DENND1AQ8TEH3 1009 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 MAML1Q92585 1016 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 WNK4Q96J92 1243 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 SERPINB12Q96P63 405 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PDCD2LQ9BRP1 358 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 DDX23Q9BUQ8 820 aaKnown RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 DCLK3Q9C098 648 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 AZI2Q9H6S1 392 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 TOPORSQ9NS56 1045 aaPredicted RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 RAB20Q9NX57 234 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 R3HDM2Q9Y2K5 976 aaKnown RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 DICER1Q9UPY3 1922 aaKnown RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 CNTNAP2Q9UHC6 1331 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 IGKV6D-21A0A0A0MT36 114 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 WDR46O15213 610 aaKnown RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 GARTP22102 1010 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 SLC18A1P54219 525 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 KRT71Q3SY84 523 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ZACNQ401N2 412 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PLEKHA7Q6IQ23 1121 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 HIBCHQ6NVY1 386 aaPredicted RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 CYB5D1Q6P9G0 228 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 MIER3Q7Z3K6 550 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 HOOK3Q86VS8 718 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 CYP4X1Q8N118 509 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 UBL4BQ8N7F7 174 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 DHX38Q92620 1227 aaKnown RBP7.43□□□□□ -1.22
PROM1-219ENST00000539194 TAAR1Q96RJ0 339 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
PROM1-219ENST00000539194 ZNF541Q9H0D2 1346 aa7.42□□□□□ -1.22
PROM1-219ENST00000539194 RALGAPA2Q2PPJ7 1873 aa7.42□□□□□ -1.22
PROM1-219ENST00000539194 C3orf70A6NLC5 250 aaPredicted RBP7.42□□□□□ -1.22
PROM1-219ENST00000539194 CCDC169A6NNP5 214 aa7.42□□□□□ -1.22
PROM1-219ENST00000539194 SLC16A4O15374 487 aa7.42□□□□□ -1.22
PROM1-219ENST00000539194 FGFR4P22455 802 aa7.42□□□□□ -1.22
PROM1-219ENST00000539194 DSG3P32926 999 aa7.42□□□□□ -1.22
PROM1-219ENST00000539194 PSMC5P62195 406 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms