RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 SLC39A4Q6P5W5 647 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 MRPL10Q7Z7H8 261 aaKnown RBP11.1□□□□□ -0.63
CLPB-210ENST00000539148 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 BRSK2Q8IWQ3 736 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 CCDC150Q8NCX0 1101 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
CLPB-210ENST00000539148 CPSF3Q9UKF6 684 aaKnown RBP11.1□□□□□ -0.63
CLPB-210ENST00000539148 IPPQ9Y573 584 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 TRIOBPQ9H2D6 2365 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 KCNJ18B7U540 433 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 C9IYK1 514 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
CLPB-210ENST00000539148 ENPP3O14638 875 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 SERPINC1P01008 464 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 TMEM191BP0C7N4 346 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 TNNI1P19237 187 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 ACOT2P49753 483 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 PMS1P54277 932 aaKnown RBP11.09□□□□□ -0.63
CLPB-210ENST00000539148 FAM189BP81408 668 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 BFSP1Q12934 665 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 KCNJ12Q14500 433 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 PSMD6Q15008 389 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 MAN2A1Q16706 1144 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 DUOXA2Q1HG44 320 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 TCP11X2Q5H9J9 407 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 TCERG1LQ5VWI1 586 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 EEF1DP3Q658K8 133 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 LRRC55Q6ZSA7 311 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 WDR49Q8IV35 697 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 RNF169Q8NCN4 708 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 PHOSPHO2Q8TCD6 241 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 SAAL1Q96ER3 474 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 ANKRD36BP1Q96IX9 119 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 ZBTB45Q96K62 511 aaPredicted RBP11.09□□□□□ -0.63
CLPB-210ENST00000539148 CNOT6LQ96LI5 555 aaKnown RBP11.09□□□□□ -0.63
CLPB-210ENST00000539148 MFSD14AQ96MC6 490 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 SLC9A7Q96T83 725 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 IMPG2Q9BZV3 1241 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 DNAI2Q9GZS0 605 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 TMX1Q9H3N1 280 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 RSAD1Q9HA92 442 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 RRAGDQ9NQL2 400 aaPredicted RBP11.09□□□□□ -0.63
CLPB-210ENST00000539148 FANCLQ9NW38 375 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 C2CD2Q9Y426 696 aa11.09□□□□□ -0.63
CLPB-210ENST00000539148 ARHGEF37A1IGU5 675 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 GOLGA8IPA6NC78 632 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 GOLGA8JA6NMD2 632 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 ABLIM1O14639 778 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 P4HA2O15460 535 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 AKAP3O75969 853 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 OSTNP61366 133 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 CYP24A1Q07973 514 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 DCAF17Q5H9S7 520 aaPredicted RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 UBXN11Q5T124 520 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 CDKAL1Q5VV42 579 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 CDR2LQ86X02 465 aaPredicted RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 CCDC112Q8NEF3 446 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 BEST2Q8NFU1 509 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 UROC1Q96N76 676 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 FAM193BQ96PV7 902 aaPredicted RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 TUBGCP2Q9BSJ2 902 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 APOL6Q9BWW8 343 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 EIF2AQ9BY44 585 aaKnown RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 SPTLC3Q9NUV7 552 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 ZMYND8Q9ULU4 1186 aaPredicted RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 UBQLN1Q9UMX0 589 aaKnown RBP11.08□□□□□ -0.64
CLPB-210ENST00000539148 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLPB-210ENST00000539148 SLC4A7Q9Y6M7 1214 aa11.08□□□□□ -0.64
CLPB-210ENST00000539148 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 TTLL13PA6NNM8 815 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 TISP43B9A030 160 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 PHACTR2O75167 634 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 RECQL4O94761 1208 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 THP07101 528 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 DLATP10515 647 aaKnown RBP11.07□□□□□ -0.64
CLPB-210ENST00000539148 KCNE1P15382 129 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
CLPB-210ENST00000539148 SYN1P17600 705 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 RNASELQ05823 741 aaKnown RBP11.07□□□□□ -0.64
CLPB-210ENST00000539148 GRIK3Q13003 919 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 ZNF365Q70YC5 407 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 CBWD2Q8IUF1 395 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 PARD3BQ8TEW8 1205 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 HERVK_113Q902F9 699 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 CCDC127Q96BQ5 260 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 KIF12Q96FN5 646 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 DDX27Q96GQ7 796 aaKnown RBP11.07□□□□□ -0.64
CLPB-210ENST00000539148 SNX27Q96L92 541 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 CGRRF1Q99675 332 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 TMEM117Q9H0C3 514 aa11.07□□□□□ -0.64
CLPB-210ENST00000539148 NXF3Q9H4D5 531 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms