RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 CACTINQ8WUQ7 758 aaKnown RBP16.69■□□□□ 0.26
VAMP1-207ENST00000539047 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 TOX2Q96NM4 488 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 IMPG2Q9BZV3 1241 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 PDE11AQ9HCR9 933 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
VAMP1-207ENST00000539047 R3HCC1Q9Y3T6 440 aaKnown RBP16.69■□□□□ 0.26
VAMP1-207ENST00000539047 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 PMM2O15305 246 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 FAM189A1O60320 539 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 CD4P01730 458 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 CXCL8P10145 99 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 HOXA11P31270 313 aaPredicted RBP16.68■□□□□ 0.26
VAMP1-207ENST00000539047 PIK3CAP42336 1068 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 DLG4P78352 724 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 PTPN21Q16825 1174 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 ZBTB41Q5SVQ8 909 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 NT5DC4Q86YG4 428 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 FMNL3Q8IVF7 1028 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 FBXL13Q8NEE6 735 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 CCDC112Q8NEF3 446 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 CRACR2AQ9BSW2 395 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 EDEM3Q9BZQ6 932 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 ASB7Q9H672 318 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 PLEKHA5Q9HAU0 1116 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 ERVK-5Q9HDB9 667 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 PLCB1Q9NQ66 1216 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 ZNHIT6Q9NWK9 470 aaKnown RBP16.68■□□□□ 0.26
VAMP1-207ENST00000539047 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
VAMP1-207ENST00000539047 LUC7L2Q9Y383 392 aaKnown RBP16.68■□□□□ 0.26
VAMP1-207ENST00000539047 XPOTO43592 962 aaKnown RBP16.67■□□□□ 0.26
VAMP1-207ENST00000539047 MFAP3LO75121 409 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 COL6A1P12109 1028 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 CD52P31358 61 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 MCCD1P59942 119 aaPredicted RBP16.67■□□□□ 0.26
VAMP1-207ENST00000539047 CLDN10P78369 228 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 PPP3CAQ08209 521 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 TBX2Q13207 712 aaPredicted RBP16.67■□□□□ 0.26
VAMP1-207ENST00000539047 LPIN1Q14693 890 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 ENOX2Q16206 610 aaKnown RBP16.67■□□□□ 0.26
VAMP1-207ENST00000539047 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 WDR44Q5JSH3 913 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 CEP120Q8N960 986 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 FAM81BQ96LP2 452 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 TSPAN18Q96SJ8 248 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 INTS2Q9H0H0 1204 aaKnown RBP16.67■□□□□ 0.26
VAMP1-207ENST00000539047 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
VAMP1-207ENST00000539047 HIPK3Q9H422 1215 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 CEP72Q9P209 647 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 PADI3Q9ULW8 664 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 ATP11BQ9Y2G3 1177 aa16.67■□□□□ 0.26
VAMP1-207ENST00000539047 GYPCP04921 128 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 PON1P27169 355 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 CASP14P31944 242 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 ZBED6P86452 979 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 TFAMQ00059 246 aaKnown RBP16.66■□□□□ 0.26
VAMP1-207ENST00000539047 TMEM132DQ14C87 1099 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 TRIM65Q6PJ69 517 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 PLEKHO2Q8TD55 490 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
VAMP1-207ENST00000539047 SPAG5Q96R06 1193 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 APOL6Q9BWW8 343 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 FTHL17Q9BXU8 183 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 EIF2AQ9BY44 585 aaKnown RBP16.66■□□□□ 0.26
VAMP1-207ENST00000539047 IFIH1Q9BYX4 1025 aaKnown RBP16.66■□□□□ 0.26
VAMP1-207ENST00000539047 TMEM117Q9H0C3 514 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 PARP2Q9UGN5 583 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 DERAQ9Y315 318 aa16.66■□□□□ 0.26
VAMP1-207ENST00000539047 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.66■□□□□ 0.26
VAMP1-207ENST00000539047 MKI67P46013 3256 aaKnown RBP16.66■□□□□ 0.26
VAMP1-207ENST00000539047 ZC3H11AO75152 810 aaKnown RBP eCLIP16.65■□□□□ 0.26
VAMP1-207ENST00000539047 KRT9P35527 623 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 KLK7P49862 253 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
VAMP1-207ENST00000539047 TLE2Q04725 743 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 TRPC3Q13507 836 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 EPC2Q52LR7 807 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 C1orf220Q5T0J3 134 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 EHBP1Q8NDI1 1231 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 APBB2Q92870 758 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 PGBD4Q96DM1 585 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 PAWRQ96IZ0 340 aaKnown RBP16.65■□□□□ 0.26
VAMP1-207ENST00000539047 NT5C1BQ96P26 610 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 PANX2Q96RD6 677 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 POP1Q99575 1024 aaKnown RBP16.65■□□□□ 0.26
VAMP1-207ENST00000539047 NXF3Q9H4D5 531 aaKnown RBP16.65■□□□□ 0.26
VAMP1-207ENST00000539047 FAM105AQ9NUU6 356 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
VAMP1-207ENST00000539047 SNTG2Q9NY99 539 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 C2CD2Q9Y426 696 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 IPPQ9Y573 584 aa16.65■□□□□ 0.26
VAMP1-207ENST00000539047 TRIP11Q15643 1979 aa16.64■□□□□ 0.25
VAMP1-207ENST00000539047 RECQL4O94761 1208 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms