RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 PSMD5Q16401 504 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 RILPL1Q5EBL4 403 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 RTP2Q5QGT7 225 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 LIN9Q5TKA1 542 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 EEF1DP3Q658K8 133 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 CWF19L1Q69YN2 538 aaKnown RBP9.51□□□□□ -0.89
DDB1-212ENST00000538470 RTL10Q7L3V2 364 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 PALB2Q86YC2 1186 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 TMEM105Q8N8V8 129 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 FEZF2Q8TBJ5 459 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 B3GALT6Q96L58 329 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 PPP1R10Q96QC0 940 aaKnown RBP9.51□□□□□ -0.89
DDB1-212ENST00000538470 RTP3Q9BQQ7 232 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 PAAF1Q9BRP4 392 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 KIFC3Q9BVG8 833 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 CCDC94Q9BW85 323 aaPredicted RBP9.51□□□□□ -0.89
DDB1-212ENST00000538470 MRPL4Q9BYD3 311 aaKnown RBP9.51□□□□□ -0.89
DDB1-212ENST00000538470 TMEM134Q9H6X4 195 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 TOPORSQ9NS56 1045 aaPredicted RBP9.51□□□□□ -0.89
DDB1-212ENST00000538470 ARHGAP28Q9P2N2 729 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 FBXL21Q9UKT6 434 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 DNM3Q9UQ16 869 aa9.51□□□□□ -0.89
DDB1-212ENST00000538470 ZFP37Q9Y6Q3 630 aaPredicted RBP9.51□□□□□ -0.89
DDB1-212ENST00000538470 RIF1Q5UIP0 2472 aaKnown RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 PROB1E7EW31 1015 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 K7ERI5 159 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 TRAPPC3O43617 180 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 ST18O60284 1047 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 N4BP1O75113 896 aaKnown RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 XYLBO75191 536 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 RPL17P18621 184 aaKnown RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 LIG1P18858 919 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 AOC1P19801 751 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 FGFR3P22607 806 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 GRM5P41594 1212 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 NPTX2P47972 431 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 YARSP54577 528 aaKnown RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 NBR1Q14596 966 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 HYIQ5T013 277 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 NT5DC1Q5TFE4 455 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 FAM171A1Q5VUB5 890 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 PRSS55Q6UWB4 352 aaPredicted RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 DTHD1Q6ZMT9 781 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 GET4Q7L5D6 327 aaPredicted RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 GLYCTKQ8IVS8 523 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 LNX1Q8TBB1 728 aaPredicted RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 HASPINQ8TF76 798 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 ATOH1Q92858 354 aaPredicted RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 MYADMQ96S97 322 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 PHOX2BQ99453 314 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 CLSTN3Q9BQT9 956 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 CDT1Q9H211 546 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 SLC38A7Q9NVC3 462 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 KCND2Q9NZV8 630 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 MTRRQ9UBK8 725 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 CACNG4Q9UBN1 327 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 WNT16Q9UBV4 365 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 KCNG1Q9UIX4 513 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 GDAQ9Y2T3 454 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 RBM19Q9Y4C8 960 aaKnown RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 PCDHB6Q9Y5E3 794 aa9.5□□□□□ -0.89
DDB1-212ENST00000538470 ZFHX2Q9C0A1 2572 aaPredicted RBP9.5□□□□□ -0.89
DDB1-212ENST00000538470 FANCMQ8IYD8 2048 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 NOTCH4Q99466 2003 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 USP34Q70CQ2 3546 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 ANHXE9PGG2 379 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 SLC26A4O43511 780 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 HIP1RO75146 1068 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 B3GAT3O94766 335 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 C8AP07357 584 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 SPATA31D3P0C874 917 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 MCF2P10911 925 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 SRFP11831 508 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 PROZP22891 400 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 FSHRP23945 695 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 GUCY2CP25092 1073 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 NBL1P41271 181 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 TOB1P50616 345 aaPredicted RBP9.49□□□□□ -0.89
DDB1-212ENST00000538470 PEX3P56589 373 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 ATP2C1P98194 919 aaPredicted RBP9.49□□□□□ -0.89
DDB1-212ENST00000538470 HTR4Q13639 388 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 RAB33AQ14088 237 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 XKR4Q5GH76 650 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 PPM1LQ5SGD2 360 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 DCLRE1AQ6PJP8 1040 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 MPZL3Q6UWV2 235 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 SPATA31D4Q6ZUB0 917 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 ANKS3Q6ZW76 656 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 CEP57Q86XR8 500 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 DAW1Q8N136 415 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 SIX5Q8N196 739 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 SPIRE2Q8WWL2 714 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 RABGGTAQ92696 567 aa9.49□□□□□ -0.89
DDB1-212ENST00000538470 DDX27Q96GQ7 796 aaKnown RBP9.49□□□□□ -0.89
DDB1-212ENST00000538470 SNX27Q96L92 541 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms