RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZNF564Q8TBZ8 553 aaPredicted RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 MORC4Q8TE76 937 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 ZBTB45Q96K62 511 aaPredicted RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 CELF4Q9BZC1 486 aaKnown RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 R3HDMLQ9H3Y0 253 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 ADARB2Q9NS39 739 aaKnown RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 K7ERI5 159 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 IRF6O14896 467 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 CNMDO75829 334 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 HLTFQ14527 1009 aaKnown RBP eCLIP15.05■□□□□ -0
LIMK1-208ENST00000538333 MESDQ14696 234 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 CLUL1Q15846 466 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 PPP2R5EQ16537 467 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 ZSCAN26Q16670 478 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 ACAD10Q6JQN1 1059 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 NCAPG2Q86XI2 1143 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 UBL4BQ8N7F7 174 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 DEPTORQ8TB45 409 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 ZNF653Q96CK0 615 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 FAM81BQ96LP2 452 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 FNBP1Q96RU3 617 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 RUFY1Q96T51 708 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 NUP85Q9BW27 656 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 C1orf112Q9NSG2 853 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 UVRAGQ9P2Y5 699 aa15.05■□□□□ -0
LIMK1-208ENST00000538333 ADGRA2Q96PE1 1338 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 A0A0B4J269 797 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 DAPK3O43293 454 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 SHOX2O60902 331 aaPredicted RBP15.04■□□□□ -0
LIMK1-208ENST00000538333 VNN1O95497 513 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 HLA-DRAP01903 254 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 KRT14P02533 472 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 TGFB3P10600 412 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 RFC5P40937 340 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 NEDD9Q14511 834 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 CLEC16AQ2KHT3 1053 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 ZBTB41Q5SVQ8 909 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 SLFN12LQ6IEE8 588 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 AADACL2Q6P093 401 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 GADL1Q6ZQY3 521 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 TARS2Q9BW92 718 aaKnown RBP15.04■□□□□ -0
LIMK1-208ENST00000538333 WNT8AQ9H1J5 351 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 TMEM134Q9H6X4 195 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 TMEM110-MUSTN1A8MSY1 372 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 CALCAP01258 141 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 UNGP13051 313 aaPredicted RBP15.04■□□□□ -0
LIMK1-208ENST00000538333 KRT5P13647 590 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 TNNI1P19237 187 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 CAPSQ13938 189 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 KCTD19Q17RG1 926 aaPredicted RBP15.04■□□□□ -0
LIMK1-208ENST00000538333 METTL7BQ6UX53 244 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 CPNE8Q86YQ8 564 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 BTBD6Q96KE9 485 aa15.04■□□□□ -0
LIMK1-208ENST00000538333 CTNNA1P35221 906 aaKnown RBP15.03■□□□□ -0
LIMK1-208ENST00000538333 COPB2P35606 906 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 STAT5BP51692 787 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 UAP1Q16222 522 aaPredicted RBP15.03■□□□□ -0
LIMK1-208ENST00000538333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.03■□□□□ -0
LIMK1-208ENST00000538333 ADAT2Q7Z6V5 191 aaKnown RBP15.03■□□□□ -0
LIMK1-208ENST00000538333 SULF1Q8IWU6 871 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 ZDHHC14Q8IZN3 488 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 ATP8B4Q8TF62 1192 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 DCPSQ96C86 337 aaKnown RBP15.03■□□□□ -0
LIMK1-208ENST00000538333 FGD4Q96M96 766 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 TRIM51Q9BSJ1 452 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 ASCC2Q9H1I8 757 aaPredicted RBP15.03■□□□□ -0
LIMK1-208ENST00000538333 ELP3Q9H9T3 547 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 NRBP2Q9NSY0 501 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 RBAKQ9NYW8 714 aaPredicted RBP15.03■□□□□ -0
LIMK1-208ENST00000538333 CALCOCO1Q9P1Z2 691 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 CNTNAP2Q9UHC6 1331 aa15.03■□□□□ -0
LIMK1-208ENST00000538333 GOLGA6L10A0A0M3HER8 536 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 ADCY3O60266 1144 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 MAFO75444 373 aaPredicted RBP15.02■□□□□ -0
LIMK1-208ENST00000538333 GGPS1O95749 300 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 LDHAP00338 332 aaKnown RBP15.02■□□□□ -0
LIMK1-208ENST00000538333 ACO1P21399 889 aaKnown RBP15.02■□□□□ -0
LIMK1-208ENST00000538333 CTNNA2P26232 953 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 TCF7P36402 384 aaPredicted RBP15.02■□□□□ -0
LIMK1-208ENST00000538333 FLT3P36888 993 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
LIMK1-208ENST00000538333 DRP2Q13474 957 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 LEKR1Q6ZMV7 388 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 ZNF677Q86XU0 584 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 SEPT1Q8WYJ6 367 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 OTUD5Q96G74 571 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 FAM114A2Q9NRY5 505 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 UTP11Q9Y3A2 253 aaKnown RBP15.02■□□□□ -0
LIMK1-208ENST00000538333 PCDHB2Q9Y5E7 798 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 MCM3APO60318 1980 aa15.02■□□□□ -0
LIMK1-208ENST00000538333 H0YGN5 161 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 HSPA6P17066 643 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 HSD17B3P37058 310 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 PIK3CAP42336 1068 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 IREB2P48200 963 aaKnown RBP15.02□□□□□ -0.01
LIMK1-208ENST00000538333 LY6KQ17RY6 165 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 WDR44Q5JSH3 913 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 FAM160B1Q5W0V3 765 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 DUPD1Q68J44 220 aa15.02□□□□□ -0.01
LIMK1-208ENST00000538333 SPOPLQ6IQ16 392 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms