RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 PHLPP2Q6ZVD8 1323 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 VWA8A3KMH1 1905 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 CCDC169A6NNP5 214 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 K7ERI5 159 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 LAD1O00515 517 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 GFRA3O60609 400 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 ZMYND10O75800 440 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 PAPLNO95428 1278 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 RFX1P22670 979 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 YARSP54577 528 aaKnown RBP10.65□□□□□ -0.7
CHD4-207ENST00000537634 DMP1Q13316 513 aaPredicted RBP10.65□□□□□ -0.7
CHD4-207ENST00000537634 NAB2Q15742 525 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 ZNF568Q3ZCX4 644 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 KRT79Q5XKE5 535 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 CWF19L1Q69YN2 538 aaKnown RBP10.65□□□□□ -0.7
CHD4-207ENST00000537634 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.65□□□□□ -0.7
CHD4-207ENST00000537634 RSAD2Q8WXG1 361 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 KIF2CQ99661 725 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 CXCL16Q9H2A7 254 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 FBXW11Q9UKB1 542 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 DNM3Q9UQ16 869 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 PCDHB6Q9Y5E3 794 aa10.65□□□□□ -0.7
CHD4-207ENST00000537634 TRIP11Q15643 1979 aa10.65□□□□□ -0.71
CHD4-207ENST00000537634 WDFY4Q6ZS81 3184 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 E9PMD0 336 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 NARSO43776 548 aaKnown RBP10.64□□□□□ -0.71
CHD4-207ENST00000537634 ST18O60284 1047 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 B3GAT3O94766 335 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 C8AP07357 584 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 CFHP08603 1231 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 HNRNPA1P09651 372 aaKnown RBP eCLIP10.64□□□□□ -0.71
CHD4-207ENST00000537634 SRFP11831 508 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 LAMP2P13473 410 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 AOC1P19801 751 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 FSHRP23945 695 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 PRPHP41219 470 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 NPTX2P47972 431 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 TOB1P50616 345 aaPredicted RBP10.64□□□□□ -0.71
CHD4-207ENST00000537634 PEX3P56589 373 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 PPM1LQ5SGD2 360 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 NT5DC1Q5TFE4 455 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 MCTP1Q6DN14 999 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 DTHD1Q6ZMT9 781 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 LNX1Q8TBB1 728 aaPredicted RBP10.64□□□□□ -0.71
CHD4-207ENST00000537634 DRC1Q96MC2 740 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 UROC1Q96N76 676 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 PPP1R10Q96QC0 940 aaKnown RBP10.64□□□□□ -0.71
CHD4-207ENST00000537634 RTP3Q9BQQ7 232 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 CLSTN3Q9BQT9 956 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 CCDC94Q9BW85 323 aaPredicted RBP10.64□□□□□ -0.71
CHD4-207ENST00000537634 TOPORSQ9NS56 1045 aaPredicted RBP10.64□□□□□ -0.71
CHD4-207ENST00000537634 TNFSF13BQ9Y275 285 aa10.64□□□□□ -0.71
CHD4-207ENST00000537634 PP2D1A8MPX8 630 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 STK25O00506 426 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 TRAPPC3O43617 180 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 HIP1RO75146 1068 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 XYLBO75191 536 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 NPR3P17342 541 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 HOXA9P31269 272 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 GRM5P41594 1212 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 OSTNP61366 133 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
CHD4-207ENST00000537634 C8orf34Q49A92 452 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 DCLRE1AQ6PJP8 1040 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 GRASPQ7Z6J2 395 aaPredicted RBP10.63□□□□□ -0.71
CHD4-207ENST00000537634 SLC44A3Q8N4M1 653 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 SLC7A14Q8TBB6 771 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 ACO2Q99798 780 aaKnown RBP10.63□□□□□ -0.71
CHD4-207ENST00000537634 RUSC1Q9BVN2 902 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 MRPL4Q9BYD3 311 aaKnown RBP10.63□□□□□ -0.71
CHD4-207ENST00000537634 CDT1Q9H211 546 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 KMT5AQ9NQR1 393 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.63□□□□□ -0.71
CHD4-207ENST00000537634 SLC38A7Q9NVC3 462 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 WNT16Q9UBV4 365 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 POLIQ9UNA4 740 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 ZFP37Q9Y6Q3 630 aaPredicted RBP10.63□□□□□ -0.71
CHD4-207ENST00000537634 CITO14578 2027 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 MYH11P35749 1972 aa10.63□□□□□ -0.71
CHD4-207ENST00000537634 SMIM28A0A1B0GU29 152 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 PROB1E7EW31 1015 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 CCL16O15467 120 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 ADAM12O43184 909 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 FGFR3P22607 806 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 CDC25AP30304 524 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 OR1D2P34982 312 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 CLCNKBP51801 687 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 HTR4Q13639 388 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 RAB33AQ14088 237 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 RABEP1Q15276 862 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 UPP1Q16831 310 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 RILPL1Q5EBL4 403 aa10.62□□□□□ -0.71
CHD4-207ENST00000537634 RINT1Q6NUQ1 792 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms