RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 RECQL4O94761 1208 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 ZSCAN20P17040 1043 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 PBX1P40424 430 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 FMO5P49326 533 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 FILIP1LQ4L180 1135 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 EFCAB13Q8IY85 973 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 ELMO3Q96BJ8 720 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 MRFAP1L1Q96HT8 127 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 ACAP3Q96P50 834 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 CCDC85CA6NKD9 419 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 CBFA2T2O43439 604 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 TPM2P07951 284 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 NFICP08651 508 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 ATF7P17544 494 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 MCCD1P59942 119 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 KCNMA1Q12791 1236 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 SYCP1Q15431 976 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 RNF169Q8NCN4 708 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 TMEM117Q9H0C3 514 aa16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.98■□□□□ 0.31
SFSWAP-206ENST00000537582 TTC26A0AVF1 554 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 TIMP1P01033 207 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 CXCL10P02778 98 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 AFF1P51825 1210 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 CLDN10P78369 228 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 MYL7Q01449 175 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 JADE1Q6IE81 842 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 VSTM4Q8IW00 320 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 C7orf61Q8IZ16 206 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 SNX27Q96L92 541 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 ZMAT2Q96NC0 199 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 FNBP1Q96RU3 617 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 CGRRF1Q99675 332 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 PARP2Q9UGN5 583 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 TET1Q8NFU7 2136 aa16.97■□□□□ 0.31
SFSWAP-206ENST00000537582 CSF2RAP15509 400 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 RAG1P15918 1043 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 TNNI1P19237 187 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 GUCY2FP51841 1108 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 FKBP15Q5T1M5 1219 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 TDRD10Q5VZ19 366 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 TMC6Q7Z403 805 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 APBB1IPQ7Z5R6 666 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 SEPT8Q92599 483 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 ZFP42Q96MM3 310 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 MTMR12Q9C0I1 747 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 RGS18Q9NS28 235 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
SFSWAP-206ENST00000537582 ANK1P16157 1881 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 A0A0U1RQF3 1178 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 C9IYK1 514 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 EPHB6O15197 1021 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 ACTN1P12814 892 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 SLC9A1P19634 815 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 MXI1P50539 228 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 TFAMQ00059 246 aaKnown RBP16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 PPP2R3AQ06190 1150 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 AGMOQ6ZNB7 445 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 SV2AQ7L0J3 742 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 ECHDC2Q86YB7 292 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 TAS1R2Q8TE23 839 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 SEMA4DQ92854 862 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 TRAIPQ9BWF2 469 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
SFSWAP-206ENST00000537582 ENPP3O14638 875 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 C4BPAP04003 597 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 ITGA4P13612 1032 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 CDC25BP30305 580 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 MLH1P40692 756 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 KYAT1Q16773 422 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 ALKAL1Q6UXT8 129 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 C15orf39Q6ZRI6 1047 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 MRPL10Q7Z7H8 261 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 WDR49Q8IV35 697 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 ERGIC2Q96RQ1 377 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 TSPYL2Q9H2G4 693 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 TMEM8AQ9HCN3 771 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 GCNT4Q9P109 453 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 IL18RAPO95256 599 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 VNN1O95497 513 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 TPM3P06753 285 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 ACRP10323 421 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 SYN1P17600 705 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 YARSP54577 528 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 ZACNQ401N2 412 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 EPC2Q52LR7 807 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 DPY19L2P1Q6NXN4 242 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 ZNF598Q86UK7 904 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 DRC7Q8IY82 874 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 KIF12Q96FN5 646 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 PDLIM2Q96JY6 352 aa16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 PCMTD1Q96MG8 357 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-206ENST00000537582 GAD1Q99259 594 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms