RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	CASTOR2	A6NHX0	329 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	TISP43	B9A030	160 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	TBCA	O75347	108 aa	Known RBP	11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	ALDH2	P05091	517 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	PDIA4	P13667	645 aa	Known RBP	11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	IL9	P15248	144 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	CA8	P35219	290 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	ME1	P48163	572 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	GRIK3	Q13003	919 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	DUSP6	Q16828	381 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	LEXM	Q3ZCV2	418 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	MPZL3	Q6UWV2	235 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	CCDC73	Q6ZRK6	1079 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	SV2B	Q7L1I2	683 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	EFHB	Q8N7U6	833 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	MRPL43	Q8N983	215 aa	Known RBP	11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	HASPIN	Q8TF76	798 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	DHX58	Q96C10	678 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	B3GALT6	Q96L58	329 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	RPS6KC1	Q96S38	1066 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	TCHP	Q9BT92	498 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	TBC1D7	Q9P0N9	293 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	TBX20	Q9UMR3	447 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	ANK1	P16157	1881 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	PLXNA3	P51805	1871 aa		11.88	□□□□□ -0.51
LDHA-215	ENST00000537296	TOM1L1	O75674	476 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	CXCL14	O95715	111 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	EFEMP2	O95967	443 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	GRM5	P41594	1212 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	CASP5	P51878	434 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	KCNA1	Q09470	495 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	KCNC3	Q14003	757 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	ZBTB41	Q5SVQ8	909 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	LLGL2	Q6P1M3	1020 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	SLC39A4	Q6P5W5	647 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	FAM178B	Q8IXR5	827 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	FEZF2	Q8TBJ5	459 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	KCNG4	Q8TDN1	519 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	ZMAT2	Q96NC0	199 aa	Known RBP	11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	GPR62	Q9BZJ7	368 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	GOLGA2P5	Q9HBQ8	144 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	RCOR1	Q9UKL0	485 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	ZMYM2	Q9UBW7	1377 aa		11.87	□□□□□ -0.51
LDHA-215	ENST00000537296	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	ANKRD63	C9JTQ0	380 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	C2CD2L	O14523	706 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	KIF4A	O95239	1232 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	CTSA	P10619	480 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	MCF2	P10911	925 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	CASP1	P29466	404 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	TNFSF9	P41273	254 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	NDUFV1	P49821	464 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	SOX4	Q06945	474 aa	Predicted RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	TUSC3	Q13454	348 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	SMC1A	Q14683	1233 aa	Known RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.86	□□□□□ -0.51	2e-8	■■□□□ 11.6
LDHA-215	ENST00000537296	PTPN14	Q15678	1187 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	AAK1	Q2M2I8	961 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	PDE12	Q6L8Q7	609 aa	Known RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	ALKAL1	Q6UXT8	129 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	ZPBP2	Q6X784	338 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	RNF168	Q8IYW5	571 aa	Predicted RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	GLIS3	Q8NEA6	775 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	LEO1	Q8WVC0	666 aa	Predicted RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	KCNN1	Q92952	543 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	HPS3	Q969F9	1004 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	BICD1	Q96G01	975 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	MSLNL	Q96KJ4	702 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	PPP1R10	Q96QC0	940 aa	Known RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	NGRN	Q9NPE2	291 aa	Known RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	CFAP45	Q9UL16	551 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	NCOR1	O75376	2440 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	SMIM28	A0A1B0GU29	152 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	GRXCR2	A6NFK2	248 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	HNRNPDL	O14979	420 aa	Known RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	POLR2D	O15514	142 aa	Known RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	FAM189A1	O60320	539 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	CLASP2	O75122	1294 aa	Known RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	TH	P07101	528 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	MYB	P10242	640 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	IDE	P14735	1019 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	LIG4	P49917	911 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	GTF2B	Q00403	316 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	SPAG1	Q07617	926 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	MCL1	Q07820	350 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	BECN1	Q14457	450 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	SLC10A6	Q3KNW5	377 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	TPRN	Q4KMQ1	711 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	RESP18	Q5W5W9	173 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	ATL3	Q6DD88	541 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	ZNF720	Q7Z2F6	126 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	TMC2	Q8TDI7	906 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	PPP2R3C	Q969Q6	453 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	C18orf25	Q96B23	403 aa	Predicted RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	SNX27	Q96L92	541 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	CCDC94	Q9BW85	323 aa	Predicted RBP	11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	APOL5	Q9BWW9	433 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	STRA6	Q9BX79	667 aa		11.86	□□□□□ -0.51
LDHA-215	ENST00000537296	CD320	Q9NPF0	282 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms