RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
UBC-204ENST00000536661 DAXXQ9UER7 740 aaPredicted RBP16.4■□□□□ 0.22
UBC-204ENST00000536661 MTMR6Q9Y217 621 aa16.4■□□□□ 0.22
UBC-204ENST00000536661 ARIH1Q9Y4X5 557 aaPredicted RBP16.4■□□□□ 0.22
UBC-204ENST00000536661 MYO10Q9HD67 2058 aa16.4■□□□□ 0.22
UBC-204ENST00000536661 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.22
UBC-204ENST00000536661 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 MAPTP10636 758 aaKnown RBP16.39■□□□□ 0.21
UBC-204ENST00000536661 MCF2P10911 925 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
UBC-204ENST00000536661 STRN3Q13033 797 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 MCM6Q14566 821 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 RTP2Q5QGT7 225 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 PRSS55Q6UWB4 352 aaPredicted RBP16.39■□□□□ 0.21
UBC-204ENST00000536661 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 GPR65Q8IYL9 337 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 RASSF8Q8NHQ8 419 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 RAD54LQ92698 747 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 ZBTB45Q96K62 511 aaPredicted RBP16.39■□□□□ 0.21
UBC-204ENST00000536661 CCSER1Q9C0I3 900 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 FBXO2Q9UK22 296 aaPredicted RBP16.39■□□□□ 0.21
UBC-204ENST00000536661 ODF2LQ9ULJ1 636 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 HCN4Q9Y3Q4 1203 aa16.39■□□□□ 0.21
UBC-204ENST00000536661 ANK1P16157 1881 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 C2CD4DB7Z1M9 353 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 BRD1O95696 1058 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 GLUD1P00367 558 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 MYBP10242 640 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 HARSP12081 509 aaKnown RBP16.38■□□□□ 0.21
UBC-204ENST00000536661 RPL17P18621 184 aaKnown RBP16.38■□□□□ 0.21
UBC-204ENST00000536661 IGFBP6P24592 240 aaPredicted RBP16.38■□□□□ 0.21
UBC-204ENST00000536661 SMTNP53814 917 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 YARSP54577 528 aaKnown RBP16.38■□□□□ 0.21
UBC-204ENST00000536661 NCKAP1LP55160 1127 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 ATAT1Q5SQI0 421 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 FAM171A1Q5VUB5 890 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 HFE2Q6ZVN8 426 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 USP49Q70CQ1 688 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 GPR149Q86SP6 731 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 GLYCTKQ8IVS8 523 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 EDAQ92838 391 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 FAM122AQ96E09 287 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 EPSTI1Q96J88 318 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 SNX27Q96L92 541 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 TCHPQ9BT92 498 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBC-204ENST00000536661 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
UBC-204ENST00000536661 FNIP2Q9P278 1114 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
UBC-204ENST00000536661 ANKFY1Q9P2R3 1169 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 KCNG1Q9UIX4 513 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 NR2E1Q9Y466 385 aa16.38■□□□□ 0.21
UBC-204ENST00000536661 SMIM28A0A1B0GU29 152 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 TMEM189-UBE2V1I3L0A0 370 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 MEFVO15553 781 aaPredicted RBP16.37■□□□□ 0.21
UBC-204ENST00000536661 TOM1L1O75674 476 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 CLCNKBP51801 687 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 ZNF131P52739 623 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
UBC-204ENST00000536661 SOX4Q06945 474 aaPredicted RBP16.37■□□□□ 0.21
UBC-204ENST00000536661 NOLC1Q14978 699 aaKnown RBP eCLIP16.37■□□□□ 0.214e-29■■□□□ 11.8
UBC-204ENST00000536661 ALKAL1Q6UXT8 129 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 ZPBP2Q6X784 338 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 PALB2Q86YC2 1186 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 C3orf58Q8NDZ4 430 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 LARP4BQ92615 738 aaKnown RBP16.37■□□□□ 0.21
UBC-204ENST00000536661 ZMAT2Q96NC0 199 aaKnown RBP16.37■□□□□ 0.21
UBC-204ENST00000536661 ACAP3Q96P50 834 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 KMT2EQ8IZD2 1858 aa16.37■□□□□ 0.21
UBC-204ENST00000536661 DOCK6Q96HP0 2047 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 H0YCG3 227 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 TGM5O43548 720 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 STX6O43752 255 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 FAM13AO94988 1023 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 SPATA31D3P0C874 917 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 ZXDAP98168 799 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 CREMQ03060 361 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 ELAVL2Q12926 359 aaKnown RBP16.36■□□□□ 0.21
UBC-204ENST00000536661 PSMD5Q16401 504 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 PTPN21Q16825 1174 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 UPP1Q16831 310 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 SEZ6Q53EL9 994 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 CD300LGQ6UXG3 332 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 C15orf39Q6ZRI6 1047 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 SPATA31D4Q6ZUB0 917 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 HAUS6Q7Z4H7 955 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 CEP57Q86XR8 500 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 TDRD5Q8NAT2 981 aaKnown RBP16.36■□□□□ 0.21
UBC-204ENST00000536661 CMASQ8NFW8 434 aaPredicted RBP16.36■□□□□ 0.21
UBC-204ENST00000536661 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 KCNN1Q92952 543 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 SNX21Q969T3 373 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 CLIC6Q96NY7 704 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 TTPALQ9BTX7 342 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 HAPLN2Q9GZV7 340 aa16.36■□□□□ 0.21
UBC-204ENST00000536661 SRPRBQ9Y5M8 271 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms