RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MAEAQ7L5Y9 396 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 HACE1Q8IYU2 909 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 SIX5Q8N196 739 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 GSTCDQ8NEC7 633 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 B3GALT6Q96L58 329 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 RUSC1Q9BVN2 902 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
PRKDC-207ENST00000536483 CCSER1Q9C0I3 900 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 NXF3Q9H4D5 531 aaKnown RBP13.7□□□□□ -0.22
PRKDC-207ENST00000536483 TMEM134Q9H6X4 195 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 WDR6Q9NNW5 1121 aaKnown RBP13.7□□□□□ -0.22
PRKDC-207ENST00000536483 IGSF9Q9P2J2 1179 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
PRKDC-207ENST00000536483 VPS37CA5D8V6 355 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-207ENST00000536483 N4BP3O15049 544 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 STX6O43752 255 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 NR1I2O75469 434 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 CFHP08603 1231 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 AKAP5P24588 427 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 NPTX2P47972 431 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 ELMSAN1Q6PJG2 1045 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 CYP26C1Q6V0L0 522 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
PRKDC-207ENST00000536483 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 CCDC105Q8IYK2 499 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 SMG7Q92540 1137 aaKnown RBP13.69□□□□□ -0.22
PRKDC-207ENST00000536483 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 STAMQ92783 540 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 MYADMQ96S97 322 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 COLEC11Q9BWP8 271 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 GPR62Q9BZJ7 368 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 PDZD7Q9H5P4 517 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
PRKDC-207ENST00000536483 SRPRBQ9Y5M8 271 aaKnown RBP13.69□□□□□ -0.22
PRKDC-207ENST00000536483 CLUHO75153 1309 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 STK25O00506 426 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 HIP1RO75146 1068 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 NPTXRO95502 500 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 PRKCBP05771 671 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 SCP2P22307 547 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 UBA7P41226 1012 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 PRPF4BQ13523 1007 aaKnown RBP13.68□□□□□ -0.22
PRKDC-207ENST00000536483 ARSHQ5FYA8 562 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 FUT10Q6P4F1 479 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 GLYCTKQ8IVS8 523 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 SLC44A3Q8N4M1 653 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 DEPTORQ8TB45 409 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 NKD2Q969F2 451 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-207ENST00000536483 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
PRKDC-207ENST00000536483 RTP3Q9BQQ7 232 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 RHOBTB2Q9BYZ6 727 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 PIDD1Q9HB75 910 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 KLK14Q9P0G3 267 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 TNFSF13BQ9Y275 285 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 SPTBN4Q9H254 2564 aa13.68□□□□□ -0.22
PRKDC-207ENST00000536483 KRBA1A5PL33 1030 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 K7ERI5 159 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 TGM5O43548 720 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 EDN1P05305 212 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 RPL17P18621 184 aaKnown RBP13.67□□□□□ -0.22
PRKDC-207ENST00000536483 NASPP49321 788 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-207ENST00000536483 ZNF131P52739 623 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 GRIN1Q05586 938 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 SLC39A14Q15043 492 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 ANGPT1Q15389 498 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 USP41Q3LFD5 358 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 NT5DC1Q5TFE4 455 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 TAS1R3Q7RTX0 852 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 DTWD2Q8NBA8 298 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 LRRC15Q8TF66 581 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 HDAC7Q8WUI4 952 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-207ENST00000536483 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 PLEKHA4Q9H4M7 779 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 EPS15L1Q9UBC2 864 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 CACNG4Q9UBN1 327 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 WNT16Q9UBV4 365 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 FBXO2Q9UK22 296 aaPredicted RBP13.67□□□□□ -0.22
PRKDC-207ENST00000536483 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 CA14Q9ULX7 337 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 CLIC4Q9Y696 253 aa13.67□□□□□ -0.22
PRKDC-207ENST00000536483 TADA2AO75478 443 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 C1RP00736 705 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 PLS3P13797 630 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 PROZP22891 400 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 DDIT3P35638 169 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 PEX3P56589 373 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 GRIK3Q13003 919 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 DMP1Q13316 513 aaPredicted RBP13.66□□□□□ -0.22
PRKDC-207ENST00000536483 DCAF4L1Q3SXM0 396 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 XKR4Q5GH76 650 aa13.66□□□□□ -0.22
PRKDC-207ENST00000536483 LILRA6Q6PI73 481 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms