RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 RAB3IPQ96QF0 476 aaPredicted RBP14.94□□□□□ -0.02
LIG1-203ENST00000536218 TEKT3Q9BXF9 490 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 RPAP3Q9H6T3 665 aaPredicted RBP14.94□□□□□ -0.02
LIG1-203ENST00000536218 KCNH7Q9NS40 1196 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 ITGA4P13612 1032 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 KIAA0753Q2KHM9 967 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 GALNTL6Q49A17 601 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 TRIM59Q8IWR1 403 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 STK32AQ8WU08 396 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 TAAR1Q96RJ0 339 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 MXRA8Q9BRK3 442 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 LXNQ9BS40 222 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 A0A1W2PQJ5 194 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 ABLIM1O14639 778 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 VCAM1P19320 739 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 CCDC6Q16204 474 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 FIGNQ5HY92 759 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 OTUD6AQ7L8S5 288 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 APBB1IPQ7Z5R6 666 aaPredicted RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 SDCCAG8Q86SQ7 713 aaPredicted RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 ZC3H18Q86VM9 953 aaKnown RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 ZWILCHQ9H900 591 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 ARMCX3Q9UH62 379 aaPredicted RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 FAM170AA1A519 330 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 WDR46O15213 610 aaKnown RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 TPBGLP0DKB5 382 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 MMP13P45452 471 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 RPS6P62753 249 aaKnown RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 RAPGEF1Q13905 1077 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 MEI1Q5TIA1 1274 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 ANGEL2Q5VTE6 544 aaKnown RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 OR52E8Q6IFG1 317 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 SEPT14Q6ZU15 432 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 MIER3Q7Z3K6 550 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 APLFQ8IW19 511 aaPredicted RBP14.93□□□□□ -0.02
LIG1-203ENST00000536218 ANKRD42Q8N9B4 389 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 CLEC4DQ8WXI8 215 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 BAP1Q92560 729 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 TMEM237Q96Q45 408 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 WRNIP1Q96S55 665 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 FMO2Q99518 471 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 TRIM51Q9BSJ1 452 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 ADAM7Q9H2U9 754 aa14.93□□□□□ -0.02
LIG1-203ENST00000536218 TMEM150BA6NC51 233 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 AKAP3O75969 853 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 PPP2R5CQ13362 524 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 COG2Q14746 738 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 DENND2CQ68D51 928 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 RDH13Q8NBN7 331 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 ATG4CQ96DT6 458 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 PJA2O43164 708 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 PEX11AO75192 247 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 GNA14O95837 355 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 NR3C1P04150 777 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 SLC9A1P19634 815 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 CACNA2D1P54289 1103 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 EIF3BP55884 814 aaKnown RBP14.92□□□□□ -0.02
LIG1-203ENST00000536218 MAP3K10Q02779 954 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 DLK2Q6UY11 383 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 C1orf186Q6ZWK4 172 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 VSIG1Q86XK7 387 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 TTC8Q8TAM2 541 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 MIPOL1Q8TD10 442 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 CCDC97Q96F63 343 aaPredicted RBP14.92□□□□□ -0.02
LIG1-203ENST00000536218 RMDN2Q96LZ7 410 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 YIPF2Q9BWQ6 316 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 PACSIN1Q9BY11 444 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 TUFT1Q9NNX1 390 aa14.92□□□□□ -0.02
LIG1-203ENST00000536218 UTP11Q9Y3A2 253 aaKnown RBP14.92□□□□□ -0.02
LIG1-203ENST00000536218 ARHGEF35A5YM69 484 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 SORBS3O60504 671 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 NOL4O94818 638 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 ZNF280AP59817 542 aaPredicted RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 DEUP1Q05D60 604 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 ODR4Q5SWX8 454 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 PDXDC1Q6P996 788 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 ADAT2Q7Z6V5 191 aaKnown RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 GDAP1Q8TB36 358 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 NACC1Q96RE7 527 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 KIAA1683Q9H0B3 1180 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 CYP39A1Q9NYL5 469 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 DBR1Q9UK59 544 aaKnown RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 STK24Q9Y6E0 443 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 ZHX2Q9Y6X8 837 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 TESPA1A2RU30 521 aaPredicted RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 CALUO43852 315 aaPredicted RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 PLA2G6O60733 806 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 HMGCS2P54868 508 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 CEP128Q6ZU80 1094 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 DNAAF5Q86Y56 855 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 FAM178BQ8IXR5 827 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 SYTL5Q8TDW5 730 aaPredicted RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 UTP4Q969X6 686 aaKnown RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 PARVGQ9HBI0 331 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 RIPK3Q9Y572 518 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 RGPD3A6NKT7 1758 aaPredicted RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 RGPD4Q7Z3J3 1758 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 CCDC169A6NNP5 214 aa14.91□□□□□ -0.02
LIG1-203ENST00000536218 NVLO15381 856 aaKnown RBP14.91□□□□□ -0.02
LIG1-203ENST00000536218 ENTPD5O75356 428 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms