RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 HMGN5P82970 282 aaKnown RBP22.69■■□□□ 1.22
LTBR-205ENST00000535739 PSMD5Q16401 504 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 NT5DC1Q5TFE4 455 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 FAM184AQ8NB25 1140 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 PIK3R5Q8WYR1 880 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 IFT74Q96LB3 600 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 LRWD1Q9UFC0 647 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 FBXW11Q9UKB1 542 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 KIAA1024Q9UPX6 916 aa22.69■■□□□ 1.22
LTBR-205ENST00000535739 PROB1E7EW31 1015 aa22.68■■□□□ 1.22
LTBR-205ENST00000535739 ADAM12O43184 909 aa22.68■■□□□ 1.22
LTBR-205ENST00000535739 IGFBP6P24592 240 aaPredicted RBP22.68■■□□□ 1.22
LTBR-205ENST00000535739 TRAPPC10P48553 1259 aa22.68■■□□□ 1.22
LTBR-205ENST00000535739 ST13P5Q8NFI4 369 aaPredicted RBP22.68■■□□□ 1.22
LTBR-205ENST00000535739 KIFAP3Q92845 792 aa22.68■■□□□ 1.22
LTBR-205ENST00000535739 ZSCAN31Q96LW9 406 aaPredicted RBP22.68■■□□□ 1.22
LTBR-205ENST00000535739 DDX19AQ9NUU7 478 aaKnown RBP22.68■■□□□ 1.22
LTBR-205ENST00000535739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.68■■□□□ 1.22
LTBR-205ENST00000535739 NOL7Q9UMY1 257 aaKnown RBP22.68■■□□□ 1.22
LTBR-205ENST00000535739 KRBA1A5PL33 1030 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 LAMP2P13473 410 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 NBL1P41271 181 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 EFNA5P52803 228 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 DCAF4L1Q3SXM0 396 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 GLRA4Q5JXX5 417 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 ATF7IP2Q5U623 682 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 ASCL5Q7RTU5 278 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 NXPE3Q969Y0 559 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 RTP3Q9BQQ7 232 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 WNT16Q9UBV4 365 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 MYH15Q9Y2K3 1946 aa22.67■■□□□ 1.22
LTBR-205ENST00000535739 SPTBN4Q9H254 2564 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 CITO14578 2027 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 NOTCH4Q99466 2003 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 STK25O00506 426 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 TOB1P50616 345 aaPredicted RBP22.66■■□□□ 1.22
LTBR-205ENST00000535739 ELAVL2Q12926 359 aaKnown RBP22.66■■□□□ 1.22
LTBR-205ENST00000535739 PTGDRQ13258 359 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 GRASPQ7Z6J2 395 aaPredicted RBP22.66■■□□□ 1.22
LTBR-205ENST00000535739 CCDC105Q8IYK2 499 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 SNX29Q8TEQ0 813 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 KIF2CQ99661 725 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 SH2B1Q9NRF2 756 aaPredicted RBP22.66■■□□□ 1.22
LTBR-205ENST00000535739 CA14Q9ULX7 337 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 PCDHB6Q9Y5E3 794 aa22.66■■□□□ 1.22
LTBR-205ENST00000535739 MYH11P35749 1972 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 K7ERI5 159 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 SRFP11831 508 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 FSHRP23945 695 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.22
LTBR-205ENST00000535739 NTHL1P78549 312 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 HTR4Q13639 388 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 PDIA5Q14554 519 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 PPM1LQ5SGD2 360 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 LIN9Q5TKA1 542 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 IGSF22Q8N9C0 903 aa22.65■■□□□ 1.22
LTBR-205ENST00000535739 PPP1R10Q96QC0 940 aaKnown RBP22.65■■□□□ 1.22
LTBR-205ENST00000535739 CCDC169A6NNP5 214 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 ANHXE9PGG2 379 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 E9PMD0 336 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 CCL16O15467 120 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 C8AP07357 584 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 CLCNKBP51801 687 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 PEX3P56589 373 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.64■■□□□ 1.21
LTBR-205ENST00000535739 FRMD5Q7Z6J6 570 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 CEP120Q8N960 986 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 DTWD2Q8NBA8 298 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 GPR152Q8TDT2 470 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 GOLGA2P5Q9HBQ8 144 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 NUMBLQ9Y6R0 609 aa22.64■■□□□ 1.21
LTBR-205ENST00000535739 PRR23AA6NEV1 266 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 PP2D1A8MPX8 630 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 B3GAT3O94766 335 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 HNRNPA1P09651 372 aaKnown RBP eCLIP22.63■■□□□ 1.21
LTBR-205ENST00000535739 FGFR3P22607 806 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 OR1D2P34982 312 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 NPTX2P47972 431 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 PDXDC1Q6P996 788 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 DCLRE1AQ6PJP8 1040 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 CD300LGQ6UXG3 332 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 DAW1Q8N136 415 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 RPP25Q9BUL9 199 aaKnown RBP22.63■■□□□ 1.21
LTBR-205ENST00000535739 POLIQ9UNA4 740 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 TNFSF13BQ9Y275 285 aa22.63■■□□□ 1.21
LTBR-205ENST00000535739 TMEM189-UBE2V1I3L0A0 370 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 HIP1RO75146 1068 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 RFX1P22670 979 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 CDC25AP30304 524 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 OSTNP61366 133 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 RAB33AQ14088 237 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 ANGPT1Q15389 498 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 IL17AQ16552 155 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 UPP1Q16831 310 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 AXDND1Q5T1B0 1012 aaPredicted RBP22.62■■□□□ 1.21
LTBR-205ENST00000535739 RSPO2Q6UXX9 243 aaPredicted RBP22.62■■□□□ 1.21
LTBR-205ENST00000535739 APBB1IPQ7Z5R6 666 aaPredicted RBP22.62■■□□□ 1.21
LTBR-205ENST00000535739 C3orf58Q8NDZ4 430 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 SLC7A14Q8TBB6 771 aa22.62■■□□□ 1.21
LTBR-205ENST00000535739 ACO2Q99798 780 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms